Job Description P0AFU4 Confidence 99.81% Date Thu Jan 5 11:27:17 GMT 2012 Rank 91 Aligned Residues 251 % Identity 15% Template c3pfiB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb; PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate Resolution 2.69 Å

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		133	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		R	E	A	I	V	T	R	S	.	.	.	P	L	M	L	R	L	L	E	Q	A	R	L	V	A	Q	S	D	V	S	V	L	I	N	G	Q	S	G	T	G	K	E	I	F	A	Q	A	I	H	N	A	S	P	R	N	S	K	P	F	I	A	I	N	C	G	A	L	P	E	Q	L	L	E	S	E	L	F	G	H	A
Query Conservation										.	.	.
Alig confidence										.	.	.																																									.	.	.																								.	.	.
Template Conservation																																																					.	.	.																								.	.	.
Template Sequence		F	D	G	Y	I	G	Q	E	S	I	K	K	N	L	N	V	F	I	A	A	A	K	K	R	N	E	C	L	D	H	I	L	F	S	G	P	A	G	L	G	K	T	T	L	A	N	I	I	S	Y	E	.	.	.	X	S	A	N	I	K	T	T	A	A	P	X	I	E	K	S	G	D	L	A	A	I	L	.	.	.
Template Known Secondary structure		S	T	T			S																		T	T										S	S	T	T	S	S												.	.	.	T	T								G	G	G			S	S								.	.	.
Template Predicted Secondary structure																																																					.	.	.																								.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	A	F	T	G	A	V	S	N	R	E	G	L	F	Q	A	A	E	G	G	T	L	F	L	D	E	I	G	D	M	P	A	P	L	Q	V	K	L	L	R	V	L	Q	E	R	K	V	R	P	L	G	S	N	R	D	I	D	I	N	V	R	I	I	S	A	T	H	R	D	L	P	K	A	M	A	R	G	E	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	L	S	E	G	D	I	L	F	I	D	E	I	H	R	L	S	P	A	I	E	E	V	L	Y	P	A	X	E	D	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	K	F	T	L	I	G	A	T	T	R	A	G	X	L	S	N	P	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.		T			T	T							S	G	G	G															T			.	.	.	.	.	.	.	.	.	.	.	.									S		G	G	G	S				.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
																99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.													.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		R	E	D	L	Y	Y	R	L	N	V	V	S	L	K	I	P	A	L	A	E	R	T	E	D	I	P	L	L	A	N	H	L	L	R	Q	A	A	E	R	H	K	P	F	V	R	A	F	S	T	D	A	M	K	R	L	M	T	A	S	W	P	G	N	V	R	Q	L	V	N	V	I	E	Q	C	V	A	L	T	.	.
Query Conservation																																																																																.	.
Alig confidence		.	.	.														.	.	.	.	.	.	.																				.	.	.														.																				.	.
Template Conservation		.	.	.														.	.	.	.	.	.	.																				.	.	.														.
Template Sequence		.	.	.	L	R	D	R	F	G	X	Q	F	R	L	E	F	.	.	.	.	.	.	.	Y	K	D	S	E	L	A	L	I	L	Q	K	A	A	L	K	L	N	K	.	.	.	T	C	E	E	K	A	A	L	E	I	A	K	R	.	S	R	S	T	P	R	I	A	L	R	L	L	K	R	V	R	D	F	A	D	V
Template Known Secondary structure		.	.	.			T	T		S								.	.	.	.	.	.	.																	T	T		.	.	.														.	T	T	T
Template Predicted Secondary structure		.	.	.														.	.	.	.	.	.	.																				.	.	.														.
Template SS confidence
					168	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
			368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	S	P	V	I	S	D	A	L	V	E	Q	A	L	E	G	E	N	T	A	L	P	T	F	V	E	A	R	N	Q	F	E	L	N	Y	L	R	K	L	L	Q	I	T	K	G	N	V	T	H	A	A	R	M	A	G	R	N	R	T	E	F	Y	K	L	L	S	R	H
Query Conservation		.
Alig confidence		.																																		.	.
Template Conservation																																				.	.
Template Sequence		N	D	E	E	I	I	T	E	K	R	A	N	E	A	L	N	S	L	G	V	N	E	L	G	F	D	A	X	D	L	R	Y	L	E	.	.	L	L	T	A	A	K	Q	K	P	I	G	L	A	S	I	A	A	A	L	S	E	D	E	N	T	I	E	D	V	I	E	P	Y
Template Known Secondary structure		T	T		S															T			T	T												.	.					T	T	T			B									T	T									T	T
Template Predicted Secondary structure																																				.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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