Job Description P0AFU4 Confidence 99.58% Date Thu Jan 5 11:27:17 GMT 2012 Rank 128 Aligned Residues 90 % Identity 27% Template c3n53B_ PDB info PDB header:transcription Chain: B: PDB Molecule:response regulator receiver modulated diguanylate cyclase; PDBTitle: crystal structure of a response regulator receiver modulated2 diguanylate cyclase from pelobacter carbinolicus Resolution 2.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	L	L	V	D	D	D	P	G	L	L	K	L	L	G	L	R	L	T	S	E	G	Y	S	V	V	T	A	E	S	G	A	E	G	L	R	V	L	N	R	E	K	V	D	L	V	I	S	D	L	R	M	D	E	M	D	G	M	Q	L	F	A	E	I	Q	K	V	Q	P	G	M	P	V	I	I	L	T	A	H
Query Conservation
Alig confidence																						.																																						.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation																						.																																						.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Sequence		K	I	L	I	I	D	Q	Q	D	F	S	R	I	E	L	K	N	F	L	D	.	S	E	Y	L	V	I	E	S	K	N	E	K	E	A	L	E	Q	I	D	H	H	H	P	D	L	V	I	L	D	X	D	N	L	C	L	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	L	I	L	L	F	.	.
Template Known Secondary structure								S													T	.	T	T	S						S	S														S														.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Predicted Secondary structure																						.																																						.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.														60	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	I	P	D	A	V	A	A	T	Q	Q	G	V	F	S	F	L	T	K	P	V	D	K	D	A	L	Y	Q	A	I	D	D	A	L	E	Q	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	A	D	D	Y	L	T	K	P	F	N	R	N	D	L	L	S	R	I	E	I	H	L	R	T	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.								S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions