Job Description P0AFU4 Confidence 98.89% Date Thu Jan 5 11:27:17 GMT 2012 Rank 173 Aligned Residues 194 % Identity 21% Template c3hu2C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97 n-d1 r86a mutant in complex with atpgs Resolution 2.85 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	D	V	S	V	L	I	N	G	Q	S	G	T	G	K	E	I	F	A	Q	A	I	H	N	A	S	P	R	N	S	K	P	F	I	A	I	N	C	G	A	L	P	E	Q	L	L	E	S	E	L	F	G	H	A	R	G	A	F	T	G	A	V	S	N	R	E	G	L	F	Q	A	A	E	G	G	T	L	F	L
Query Conservation
Alig confidence																													.	.	.										.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.										.	.	.	.	.	.	.	.	.
Template Sequence		K	P	P	R	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	I	A	R	A	V	A	N	E	T	.	.	.	G	A	F	F	F	L	I	N	G	.	.	.	.	.	.	.	.	.	P	E	I	M	S	K	L	A	G	E	S	E	S	N	L	R	K	A	F	E	E	A	E	K	N	A	P	A	I	I	F	I
Template Known Secondary structure												S	T	T	S	S													.	.	.	S	S								.	.	.	.	.	.	.	.	.					T	S		T	T																S	S	S
Template Predicted Secondary structure																													.	.	.										.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.	270	.										.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		235	.	.	.	.	240	.	.	.												.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																																					.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.																																					.	.	.
Query Sequence		D	E	I	G	D	M	P	A	P	.	.	.	.	.	.	.	.	.	.	.	L	Q	V	K	L	L	R	V	L	Q	E	R	K	V	R	P	L	G	S	N	R	D	I	D	I	N	V	R	I	I	S	A	T	H	R	D	.	.	.	L	P	K	A	M	A	R	G	E	F	R	E	D	L	Y	Y	R	L	N	V	V
Query Conservation											.	.	.	.	.	.	.	.	.	.	.																																					.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																	.	.	.												.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template Sequence		D	E	L	D	A	I	A	P	K	R	E	K	T	H	G	E	V	E	R	R	I	V	S	Q	L	L	T	L	M	D	G	.	.	.	.	.	.	.	.	.	L	K	Q	R	A	H	V	I	V	M	A	A	T	N	R	P	N	S	I	D	P	A	L	R	R	F	G	R	F	D	.	.	.	.	.	.	.	R	E	V
Template Known Secondary structure			S	G	G	G	T		B		S	S	S																				.	.	.	.	.	.	.	.	.	S		G	G	G									S		G	G	G	B		G	G	G	G	S	T	T	S	S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.										.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.								.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	K	I	P	A	L	A	E	R	T	E	D	I	P	L	L	A	N	H	L	L	R	Q	A	A	E	R	H	K	P	F	V	R	A	F	S	T	D	A	M	K	R	L	M	T	A	S	W	P	G	N	V	R	Q	L	V	N	V	I	E	Q	C	V	A	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.							.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.							.	.	.	.	.	.	.	.
Template Sequence		D	I	G	I	P	D	A	T	G	R	L	E	.	.	.	.	I	L	Q	I	H	T	.	.	.	.	.	.	.	.	K	N	M	K	L	A	D	D	V	D	L	E	Q	V	A	N	E	T	H	G	H	V	G	A	D	L	A	A	L	C	S	E	A	A	L	Q	A	I	R	K	K	M	D	L	I	D	L	E	D	E
Template Known Secondary structure														.	.	.	.						S	.	.	.	.	.	.	.	.	T	T	S		B		T	T											T	T																					T	T	T	S			T	T	S	S
Template Predicted Secondary structure														.	.	.	.							.	.	.	.	.	.	.	.
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.					380	.	.	.	.	.									.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
									368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	S	S	P	V	I	S	D	A	L	V	E	Q	A	L	E	G	E	N	T	A	L
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	I	D	A	E	V	M	N	S	L	A	V	T	M	D	D	F	R	W	A	L	S	Q	S	N	P	S	A
Template Known Secondary structure		S											B
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions