Job Description P0AFU4 Confidence 99.83% Date Thu Jan 5 11:27:17 GMT 2012 Rank 71 Aligned Residues 122 % Identity 22% Template c3grcD_ PDB info PDB header:transferase Chain: D: PDB Molecule:sensor protein, kinase; PDBTitle: crystal structure of a sensor protein from polaromonas sp.2 js666 Resolution 2.21 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		K	P	A	H	L	L	L	V	D	D	D	P	G	L	L	K	L	L	G	L	R	L	T	S	E	G	Y	S	V	V	T	A	E	S	G	A	E	G	L	R	V	L	N	R	E	K	V	D	L	V	I	S	D	L	R	M	D	E	M	D	G	M	Q	L	F	A	E	I	Q	K	V	.	.	Q	P	G	M	P	V	I
Query Conservation																																																																									.	.
Alig confidence																																																																									.	.
Template Conservation
Template Sequence		P	R	P	R	I	L	I	C	E	D	D	P	D	I	A	R	L	L	N	L	X	L	E	K	G	G	F	D	S	D	X	V	H	S	A	A	Q	A	L	E	Q	V	A	R	R	P	Y	A	A	X	T	V	D	L	N	L	P	D	Q	D	G	V	S	L	I	R	A	L	R	R	D	S	R	T	R	D	L	A	I	V
Template Known Secondary structure				S							S	S														T	T							S	S									T	T	S			S						S	S		S	S	S												S	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		I	L	T	A	H	G	S	I	P	D	A	V	.	A	A	T	Q	Q	G	V	F	S	F	L	T	K	P	V	D	K	D	A	L	Y	Q	A	I	D	D	A	L	E	Q	S	A
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		V	V	S	A	N	A	R	E	G	E	L	E	F	N	S	Q	P	L	A	V	S	T	W	L	E	K	P	I	D	E	N	L	L	I	L	S	L	H	R	A	I	D	N	X	A
Template Known Secondary structure					T	T								T	T	T		T	T	S	S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		626	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions