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Job DescriptionP0AFU4
Confidence99.49%DateThu Jan 5 11:27:17 GMT 2012
Rank138Aligned Residues217
% Identity18%Templatec3f9vA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:minichromosome maintenance protein mcm; PDBTitle: crystal structure of a near full-length archaeal mcm: functional2 insights for an aaa+ hexameric helicase
Resolution4.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   155....160.........170.........180.........190.........200.........210.........220.........230....
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Query Sequence  QSDVSVLINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVSNREGLFQAAEGGTLFL
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Template Sequence  RGDIHILIIGDPGTAKSQMLQFISRVAPRA. . . VYTTGKGSTAAGLTAAVVREKGTGEYY. . . . LEAGALVLADGGIAVI
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   331........340.........350.........360 .........370.........380....... ..390.........400...
 
   235....240.........250........ .260.........270....... ..280.........290.........300......
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Query Sequence  DEIGDMPAPLQVKLLRVLQERKVR. . PLGSNRDIDINVRIISATH. . . . . . RDLPKAMARGEFREDLYYRLNVVSLKIPA
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Template Sequence  DEIDKMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQ
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   404.....410.........420.........430.........440.........450.........460.........470.........480...
 
   307..310...... ...320.........330.........340....... ..350....
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Query Sequence  LAERTEDIPL. . . . . . . . . . . . . . . . . . LANHLLRQAAERHKPFVRAFSTDAMKRLMTA. . . . . . . . . . . . . . SWPGNVR
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Template Sequence  PGEQDRELANYILDVHSGKSTKNIIDIDTLRKYIAYARKYVT. . . PKITSEAKNLITDFFVEMRKKSSETPDSPILITPR
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   484.....490.........500.........510.........520..... ....530.........540.........550.........560
 
   355....360........ .370.........380.
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Query Sequence  QLVNVIEQCVALTS. . . SPVISDALVEQAL
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Template Sequence  QLEALIRISEAYAKMALKAEVTREDAERAI
Template Known Secondary structure  TTTTTSS

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   561........570.........580.........590
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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