Job Description P0AFU4 Confidence 94.43% Date Thu Jan 5 11:27:17 GMT 2012 Rank 250 Aligned Residues 113 % Identity 12% Template c3ezxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:monomethylamine corrinoid protein 1; PDBTitle: structure of methanosarcina barkeri monomethylamine2 corrinoid protein Resolution 2.56 Å

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		2	.	.	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.			.	.	.	.	.	.	.	70
Predicted Secondary structure												.	.	.	.																										.	.	.																				.	.								.	.
Query SS confidence												.	.	.	.																										.	.	.																				.	.								.	.
Query Sequence		S	H	K	P	A	H	L	L	L	V	.	.	.	.	D	D	D	P	G	L	L	K	L	L	G	L	R	L	T	S	E	G	Y	S	V	V	T	A	E	.	.	.	S	G	A	E	G	L	R	V	L	N	R	E	K	V	D	L	V	I	S	.	.	D	L	R	M	D	E	M	.	.	D	G	M	Q	L	F	A	E
Query Conservation												.	.	.	.																										.	.	.																				.	.								.	.
Alig confidence												.	.	.	.																										.	.	.																				.	.								.	.
Template Conservation
Template Sequence		K	K	E	A	G	L	A	I	T	F	V	A	E	G	D	I	H	D	I	G	H	R	L	V	T	T	M	L	G	A	N	G	F	Q	I	V	D	L	G	V	D	V	L	N	E	N	V	V	E	E	A	A	K	H	K	G	E	K	V	L	L	V	G	S	A	L	M	T	T	S	M	L	G	Q	K	D	L	M	D	R
Template Known Secondary structure														T	T																	T	S								S	S													T	T	T	S									S	S					T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		71	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		I	Q	K	V	.	.	Q	P	G	M	P	V	I	I	L	T	A	H	G	S	I	P	D	A	V	A	A	T	Q	Q	G	V	F	S	F	L	T	K	P	V	D	K	D	A	L	Y	Q	A	I
Query Conservation						.	.
Alig confidence						.	.																						.	.	.
Template Conservation																													.	.	.
Template Sequence		L	N	E	E	K	L	R	D	S	V	K	C	M	F	G	G	A	P	V	S	D	K	W	I	E	E	I	.	.	.	G	A	D	A	T	A	E	N	A	A	E	A	A	K	V	A	L	E	V
Template Known Secondary structure					T	T		G	G	G	S						S	S	S										.	.	.	T			B			S	S											T
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions