Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFU4
Confidence99.90%DateThu Jan 5 11:27:17 GMT 2012
Rank9Aligned Residues126
% Identity32%Templatec3eq2A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:probable two-component response regulator; PDBTitle: structure of hexagonal crystal form of pseudomonas2 aeruginosa rssb
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  PAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKVDLVISDLRMDEMDGMQLFAEIQKVQPGMPVIILT
Query Conservation    







      
   
   
  
  
     
   
     





  

   
   
  

      





Alig confidence 















































































Template Conservation    






       
   
   
  
  
  
 


        



 
  

  

 

   

      


 

Template Sequence  SATLLIIDDDEVVRESLAAYLEDSNFKVLQALNGLQGLQIFESEQPDLVICDLRXPQIDGLELIRRIRQTASETPIIVLG
Template Known Secondary structure 
S
TT
SSS

S


SSSS
TTT





Template Predicted Secondary structure 


























Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   85....90.........100.........110.........120.........130...
Predicted Secondary structure 


































Query SS confidence 
















































Query Sequence  AHGSIPDAVAATQQGVFSFLTKPVDKDALYQAIDDALEQSAPATDERWR
Query Conservation            
   

 


 

     
   
   
            
Alig confidence 



...









































Template Conservation     
...   
   

 


 

     

                   
Template Sequence  VXSD. . . AVEALRLGAADYLIKPLEDLAVLEHSVRRALDRAYLRVENQR
Template Known Secondary structure  ...T
S

SS
S
T
Template Predicted Secondary structure 
...






















Template SS confidence 
















































   88.90. ........100.........110.........120.........130...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions