Job Description P0AFU4 Confidence 99.87% Date Thu Jan 5 11:27:17 GMT 2012 Rank 45 Aligned Residues 126 % Identity 20% Template c3cu5B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:two component transcriptional regulator, arac family; PDBTitle: crystal structure of a two component transcriptional regulator arac2 from clostridium phytofermentans isdg Resolution 2.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		P	A	H	L	L	L	V	D	D	D	P	G	L	L	K	L	L	G	L	R	L	T	S	E	G	Y	.	.	.	S	V	V	T	A	E	S	G	A	E	G	L	R	V	L	N	R	E	K	V	D	L	V	I	S	D	L	R	M	D	E	M	D	G	M	Q	L	F	A	E	I	Q	K	V	Q	P	G	M	P	V	I
Query Conservation																												.	.	.
Alig confidence																												.	.	.
Template Conservation
Template Sequence		S	L	R	I	L	I	V	D	D	E	K	L	T	R	D	G	L	I	A	N	I	N	W	K	A	L	S	F	D	Q	I	D	Q	A	D	D	G	I	N	A	I	Q	I	A	L	K	H	P	P	N	V	L	L	T	D	V	R	M	P	R	M	D	G	I	E	L	V	D	N	I	L	K	L	Y	P	D	C	S	V	I
Template Known Secondary structure										S											T	S		T	T	T	S									S	S											S			S						S			T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	T	A	H	G	S	I	P	D	A	V	A	A	T	Q	Q	G	V	F	S	F	L	T	K	P	V	D	K	D	A	L	Y	Q	A	I	D	D	A	L	E	Q	S	A	P	A	T	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	M	S	G	Y	S	D	K	E	Y	L	K	A	A	I	K	F	R	A	I	R	Y	V	E	K	P	I	D	P	S	E	I	M	D	A	L	K	Q	S	I	Q	T	V	L	Q	H	Q	A	Q
Template Known Secondary structure						T	T											S	S							S	S			T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions