Job Description P0AFU4 Confidence 99.03% Date Thu Jan 5 11:27:17 GMT 2012 Rank 165 Aligned Residues 228 % Identity 18% Template c3b9pA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin Resolution 2.70 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150											.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	R	W	R	E	A	I	V	T	R	S	P	L	M	L	R	L	L	E	Q	A	.	.	.	.	.	.	.	.	.	.	R	L	V	A	Q	S	D	V	S	V	L	I	N	G	Q	S	G	T	G	K	E	I	F	A	Q	A	I	H	N	A	S	P	R	N	S	K	P	F	I	A	I	N	C	G	A	L	P	E
Query Conservation																								.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.																																.	.	.										.	.	.	.	.
Template Conservation																																																																	.	.	.										.	.	.	.	.
Template Sequence		A	K	V	E	W	T	D	I	A	G	Q	D	V	A	K	Q	A	L	Q	E	M	V	I	L	P	S	V	R	P	E	L	F	T	G	L	R	A	P	A	K	G	L	L	L	F	G	P	P	G	N	G	K	T	L	L	A	R	A	V	A	T	E	C	.	.	.	S	A	T	F	L	N	I	S	A	.	.	.	.	.
Template Known Secondary structure		S				G	G	G	S														T							G	G	G	S		G	G	G				S						S	S	S	S	S													T	.	.	.	T								S	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.										.	.	.	.	.
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540				.	.	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240							.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		Q	L	L	E	S	E	L	F	G	H	A	R	G	A	F	T	G	A	V	S	N	R	E	G	L	F	Q	A	A	E	G	G	T	L	F	L	D	E	I	G	D	M	.	.	.	.	.	.	P	A	P	L	Q	V	K	L	L	R	V	L	Q	E	R	K	V	R	P	L	G	S	N	R	D	I	D	I	N	V	R	I
Query Conservation																																												.	.	.	.	.	.
Alig confidence		.	.	.	.																																							.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	A	S	L	T	S	K	Y	V	G	D	G	E	K	L	V	R	A	L	F	A	V	A	R	H	M	Q	P	S	I	I	F	I	D	E	V	D	S	L	L	S	E	R	E	A	S	R	R	L	K	T	E	F	L	V	E	F	D	G	L	P	.	.	.	.	.	.	.	.	.	.	.	.	R	I	V	V
Template Known Secondary structure		.	.	.	.	T	T	T	S	S	S	S		S																T		S							T	G	G	G	T	S	B					S																.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.																																																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.													610	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		I	S	A	T	H	R	D	L	P	K	A	M	A	R	G	E	F	R	E	D	L	Y	Y	R	L	N	V	.	V	S	L	K	I	P	A	L	A	E	R	T	E	D	I	P	L	L	A	N	H	L	L	R	Q	A	A	E	R	H	K	P	F	V	R	A	F	S	T	D	A	M	K	R	L	M	T	A	S	W	P	G
Query Conservation																													.
Alig confidence								.	.	.	.	.	.	.															.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	A	T	N	R	.	.	.	.	.	.	.	P	Q	E	L	D	E	A	A	L	R	R	F	T	K	R	V	Y	V	S	L	P	D	E	Q	T	R	E	.	.	.	.	.	.	.	.	.	.	.	L	L	L	N	R	L	L	Q	K	Q	G	S	P	L	D	T	E	A	L	R	R	L	A	K	I	T	D	G	Y
Template Known Secondary structure						S		.	.	.	.	.	.	.	G	G	G	B																								.	.	.	.	.	.	.	.	.	.	.								G	G	G	S			S												T	T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		625	.	.	.	.	630								.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.												.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.								.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																		.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.
Query Sequence		N	V	R	Q	L	V	N	V	I	E	Q	C	V	A	L	T	.	.	.	.	.	.	.	S	S	P	V	I	S	D	A	L	V	E	Q	A	L	E	G	E	N	T	A	L	P	T	F	V	E	A	R	N	Q	F	E	L
Query Conservation																		.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.																								.	.
Template Conservation																																																.	.
Template Sequence		S	G	S	D	L	T	A	L	A	K	D	A	A	L	E	P	I	R	E	L	N	I	S	A	M	R	A	I	T	E	Q	D	F	H	S	S	L	K	R	I	R	R	S	V	A	P	.	.	Q	S	L	N	S	Y	E	K
Template Known Secondary structure														T	T					T																		T	T	S				S	S			.	.
Template Predicted Secondary structure																																																.	.
Template SS confidence
		687	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.			.	.	.	.	.	.	.	740

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions