Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFU4
Confidence99.90%DateThu Jan 5 11:27:17 GMT 2012
Rank10Aligned Residues132
% Identity24%Templatec2rjnA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:response regulator receiver:metal-dependent PDBTitle: crystal structure of an uncharacterized protein q2bku2 from2 neptuniibacter caesariensis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  KPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRVLNREKVDLVISDLRMDEMDGMQLFAEIQKVQPGMPVIIL
Query Conservation     







      
   
   
  
  
     
   
     





  

   
   
  

      




Alig confidence 















































































Template Conservation      





       
   
   
  
       

   
     
 

 
  

   
      

       

 
Template Sequence  KNYTVMLVDDEQPILNSLKRLIKRLGCNIITFTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVI
Template Known Secondary structure  S


S
TTT
S
TTS

SSS
SSS

TTS
Template Predicted Secondary structure 






























Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   84.....90.........100 .........110.........120.........130.....
Predicted Secondary structure 






.





























Query SS confidence 
















.


































Query Sequence  TAHGSIPDAVAATQQGV. FSFLTKPVDKDALYQAIDDALEQSAPATDERWREA
Query Conservation 
          
   

. 


 

     
   
   
              
Alig confidence 
















.


































Template Conservation 
              
     
 

     
   
   
       
   
 
Template Sequence  SGYADAQATIDAVNRGKISRFLLKPWEDEDVFKVVEKGLQLAFLREENLRLQE
Template Known Secondary structure 
GGGTT

SSS

TTS


Template Predicted Secondary structure 















Template SS confidence 




















































   86...90.........100.........110.........120.........130........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions