Job Description P0AFU4 Confidence 93.26% Date Thu Jan 5 11:27:17 GMT 2012 Rank 277 Aligned Residues 43 % Identity 9% Template c2k9sA_ PDB info PDB header:transcription Chain: A: PDB Molecule:arabinose operon regulatory protein; PDBTitle: solution structure of dna binding domain of e. coli arac Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		L	N	Y	L	R	K	L	L	Q	I	T	K	G	N	V	T	H	A	A	R	M	A	G	R	N	R	T	E	F	Y	K	L	L	S	R	H	.	E	L	D	A	N	D	F
Query Conservation																																						.
Alig confidence																																						.
Template Conservation
Template Sequence		C	Q	Y	I	S	D	H	L	A	D	S	N	F	D	I	A	S	V	A	Q	H	V	C	L	S	P	S	R	L	S	H	L	F	R	Q	Q	L	G	I	S	V	L	S	W
Template Known Secondary structure								T	S	S		S	S										T	T	S														S	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions