Job Description P0AFU4 Confidence 99.80% Date Thu Jan 5 11:27:17 GMT 2012 Rank 92 Aligned Residues 116 % Identity 16% Template c2j48A_ PDB info PDB header:transferase Chain: A: PDB Molecule:two-component sensor kinase; PDBTitle: nmr structure of the pseudo-receiver domain of the cika2 protein. Resolution UNK

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		P	A	H	L	L	L	V	D	D	D	P	G	L	L	K	L	L	G	L	R	L	T	S	E	G	Y	S	V	V	T	A	E	S	G	A	E	G	L	R	V	L	N	R	E	K	V	D	L	V	I	S	D	L	R	M	D	E	M	D	G	M	Q	L	F	A	E	I	Q	K	V	.	.	Q	P	G	M	P	V	I	I
Query Conservation																																																																								.	.
Alig confidence																																																																								.	.
Template Conservation
Template Sequence		A	G	H	I	L	L	L	E	E	E	D	E	A	A	T	V	V	C	E	M	L	T	A	A	G	F	K	V	I	W	L	V	D	G	S	T	A	L	D	Q	L	D	L	L	Q	P	I	V	I	L	M	A	W	P	P	P	D	Q	S	C	L	L	L	L	Q	H	L	R	E	H	Q	A	D	P	H	P	P	L	V	L
Template Known Secondary structure																									T	T							S															S							S	T	T			T											T				S	S
Template Predicted Secondary structure
Template SS confidence
		627	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	H	G	S	I	P	D	A	V	A	A	T	Q	Q	G	V	F	S	F	L	T	K	P	V	D	K	D	A	L	Y	Q	A	I	D	D	A	L	E	Q
Query Conservation
Alig confidence										.	.	.
Template Conservation										.	.	.
Template Sequence		F	L	G	E	P	P	V	D	.	.	.	P	L	L	T	A	Q	A	S	A	I	L	S	K	P	L	D	P	Q	L	L	L	T	T	L	Q	G	L	C	P	P
Template Known Secondary structure				S	S			S	S	.	.	.								S				S	S		S	T	T									T	T
Template Predicted Secondary structure										.	.	.
Template SS confidence
		707	.	.	710	.	.	.	.				.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions