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Job DescriptionP0AFU4
Confidence99.47%DateThu Jan 5 11:27:17 GMT 2012
Rank139Aligned Residues198
% Identity17%Templatec2hcbC_
PDB info PDB header:replicationChain: C: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus
Resolution3.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IVT. . RSPLMLRLLEQARLVAQSDVSVLINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLESELFGHARGAF
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Template Sequence  IVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADD. . . . . FAQAMVEHLKKGT
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   8990.........100.........110.........120.........130.........140.........150 .........160...
 
   214.....220.........230.........240.........250.........260.........270.........280.........290...
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Query Sequence  TGAVSNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLPKAMARGEFREDL
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Template Sequence  INEF. . . . . RNMYKSVDLLLLDDVQFLSGKERTQIEFFHIF. . . . . . . . NTLYLLEKQIILASDRHPQKL. . . DGVSDRL
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Query Sequence  YYRLNVVSLKI. . PALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNVIEQCVALT
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Template Sequence  VSRFEGGILVEIELDNKTR. . . . . . . . FKIIKEKLKEFNL. . . ELRKEVIDYLLEN. . TKNVREIEGKIKLIKLKG
Template Known Secondary structure  S



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   228.230.........240...... ...250......... 260.........270.. .......280.........290
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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