Job Description P0AFU4 Confidence 94.96% Date Thu Jan 5 11:27:17 GMT 2012 Rank 243 Aligned Residues 119 % Identity 13% Template c2gnoA_ PDB info PDB header:replication Chain: A: PDB Molecule:dna polymerase iii, gamma subunit-related protein; PDBTitle: crystal structure of a dna polymerase iii, gamma subunit-related2 protein (tm0771) from thermotoga maritima msb8 at 2.00 a resolution Resolution 2.00 Å

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		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																	.	.	.							.	.
Query SS confidence																																	.	.	.							.	.
Query Sequence		D	V	S	V	L	I	N	G	Q	S	G	T	G	K	E	I	F	A	Q	A	I	H	N	A	S	P	R	N	S	K	P	.	.	.	F	I	A	I	N	C	.	.	G	A	L	P	E	Q	L	L	E	S	E	L	F	G	H	A	R	G	A	F	T	G	A	V	S	N	R	E	G	L	F	Q	A	A	E	G	G	T
Query Conservation																																	.	.	.							.	.
Alig confidence																																	.	.	.							.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	S	I	L	I	N	G	E	D	L	S	Y	P	R	E	V	S	L	E	L	P	E	Y	V	E	K	F	P	P	K	A	S	D	V	L	E	I	D	P	E	G	E	N	I	G	I	D	D	I	R	T	I	K	D	F	L	N	Y	S	P	E	L	Y	T	R	K	.	.	.	.	.	.	.	.	.	.	.	.	Y
Template Known Secondary structure		S								S	S	S	S															T	S				T	T	T							S	S	S		B													T	S			S	S	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.													.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	L	D	E	I	G	D	M	P	A	P	L	Q	V	K	L	L	R	V	L	Q	E	R	K	V	R	P	L	G	S	N	R	D	I	D	I	N	V	R	I	I	S	A	T	H	R	D	L	P	K	A	M	A	R	G	E	F	R	E	D	L	Y	Y	R	L	N	V	V	S	L	K	I	P
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Sequence		V	I	V	H	D	C	E	R	X	T	Q	Q	A	A	N	A	F	L	K	A	L	E	E	.	.	.	.	.	.	.	.	.	.	.	P	P	E	Y	A	V	I	V	L	N	T	R	R	.	.	.	.	.	.	.	W	H	Y	L	L	P	T	I	K	S	R	V	F	R	V	V	V	N	V	P
Template Known Secondary structure					T	T	G	G	G	B								T						S	.	.	.	.	.	.	.	.	.	.	.			T	T								S		.	.	.	.	.	.	.	G	G	G	S						T	T	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.												.	.	.	.	120	.	.	.	.	.	.	.	.								.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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