Job Description P0AFU4 Confidence 96.15% Date Thu Jan 5 11:27:17 GMT 2012 Rank 230 Aligned Residues 113 % Identity 18% Template c1y80A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted cobalamin binding protein; PDBTitle: structure of a corrinoid (factor iiim)-binding protein from2 moorella thermoacetica Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.
Predicted Secondary structure													.	.	.	.																									.	.	.																												.	.
Query SS confidence													.	.	.	.																									.	.	.																												.	.
Query Sequence		M	S	H	K	P	A	H	L	L	L	V	.	.	.	.	D	D	D	P	G	L	L	K	L	L	G	L	R	L	T	S	E	G	Y	S	V	V	T	A	.	.	.	E	S	G	A	E	G	L	R	V	L	N	R	E	K	V	D	L	V	I	S	D	L	R	M	D	E	M	.	.	D	G	M	Q	L	F	A	E	I
Query Conservation													.	.	.	.																									.	.	.																												.	.
Alig confidence							.						.	.	.	.																									.	.	.																												.	.
Template Conservation							.
Template Sequence		M	P	S	V	G	.	K	I	V	L	G	T	V	K	G	D	L	H	D	I	G	K	N	L	V	A	M	M	L	E	S	G	G	F	T	V	Y	N	L	G	V	D	I	E	P	G	K	F	V	E	A	V	K	K	Y	Q	P	D	I	V	G	M	S	A	L	L	T	T	T	M	M	N	M	K	S	T	I	D	A	L
Template Known Secondary structure							.							B	T	T																	T	T								S	S	B															S								S	G	G	G	T
Template Predicted Secondary structure							.
Template SS confidence
		85	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		72	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		Q	K	V	.	.	Q	P	G	M	P	V	I	I	L	T	A	H	G	S	I	P	D	A	V	A	A	T	Q	Q	G	V	F	S	F	L	T	K	P	V	D	K	D	A	L	Y	Q	A	I
Query Conservation					.	.
Alig confidence					.	.																						.	.	.
Template Conservation																												.	.	.
Template Sequence		I	A	A	G	L	R	D	R	V	K	V	I	V	G	G	A	P	L	S	Q	D	F	A	D	E	I	.	.	.	G	A	D	G	Y	A	P	D	A	A	S	A	T	E	L	C	R	Q	L
Template Known Secondary structure				T	T		G	G	G							S	T	T										.	.	.	T		S				S	S
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions