Job Description P0AFU4 Confidence 85.83% Date Thu Jan 5 11:27:17 GMT 2012 Rank 491 Aligned Residues 78 % Identity 13% Template c1xx6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidine kinase; PDBTitle: x-ray structure of clostridium acetobutylicum thymidine kinase with2 adp. northeast structural genomics target car26. Resolution 2.00 Å

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		160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		V	L	I	N	G	Q	S	G	T	G	K	E	I	.	F	A	Q	A	I	H	N	A	S	P	R	N	S	K	P	F	I	A	I	N	C	G	A	L	P	E	Q	L	L	E	S	E	L	F	G	H	A	R	G	A	F	T	G	A	V	S	N	R	E	G	L	F	Q	A	A	E	G	G	T	L	F	L	D	E	I	G
Query Conservation															.
Alig confidence															.									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	I	V	G	P	X	Y	S	G	K	S	E	E	L	I	R	R	I	R	R	A	.	K	I	A	K	Q	K	I	Q	V	F	K	P	E	A	V	A	I	K	N	S	R	E	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Y	F	E	E	D	T	E	V	I	A	I	D	E	V	Q
Template Known Secondary structure							S	T	T	S	S													.			T	T														S	S	S	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T		S						S	G	G
Template Predicted Secondary structure																								.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	P	A	P	L	Q	V	K	L	L	R	V	L	Q	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	D	D	E	I	V	E	I	V	N	K	I	A	E	S	G
Template Known Secondary structure		G	S		T												T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions