Job Description P0AFU4 Confidence 99.22% Date Thu Jan 5 11:27:17 GMT 2012 Rank 159 Aligned Residues 43 % Identity 14% Template c1umqA_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein; PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	Q	F	E	L	N	Y	L	R	K	L	L	Q	I	T	K	G	N	V	T	H	A	A	R	M	A	G	R	N	R	T	E	F	Y	K	L	L	S	R	H	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	R	V	R	W	E	H	I	Q	R	I	Y	E	M	C	D	R	N	V	S	E	T	A	R	R	L	N	M	H	R	R	T	L	Q	R	I	L	A	K	R	S	P
Template Known Secondary structure																	T	T	S										T	S											T	S	S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions