Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFU4
Confidence88.86%DateThu Jan 5 11:27:17 GMT 2012
Rank421Aligned Residues44
% Identity9%Templatec1r71B_
PDB info PDB header:transcription/dnaChain: B: PDB Molecule:transcriptional repressor protein korb; PDBTitle: crystal structure of the dna binding domain of korb in2 complex with the operator dna
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   397..400.........410.........420.........430.........440
Predicted Secondary structure 









Query SS confidence 











































Query Sequence  QFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDAN
Query Conservation    

  
  

    

   

  




 

 



  

   
Alig confidence 











































Template Conservation 
 
 
     
   
 
  


  

 
 
 

  
 
  

  
Template Sequence  PREIADFIGRELAKGKKKGDIAKEIGKSPAFITQHVTLLDLPEK
Template Known Secondary structure  TT

TT

GGGS

Template Predicted Secondary structure 









Template SS confidence 











































   154.....160.........170.........180.........190.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions