Job Description P0AFU4 Confidence 99.75% Date Thu Jan 5 11:27:17 GMT 2012 Rank 113 Aligned Residues 218 % Identity 16% Template c1r6bX_ PDB info PDB header:hydrolase Chain: X: PDB Molecule:clpa protein; PDBTitle: high resolution crystal structure of clpa Resolution 2.25 Å

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		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	L	M	L	R	L	L	E	Q	A	R	L	V	A	Q	S	D	V	S	V	L	I	N	G	Q	S	G	T	G	K	E	I	F	A	Q	A	I	H	N	A	S	P	R	N	S	K	P	F	I	A	I	N	C	G	A	L	P	E	Q	L	L	E	S	E	L	F	G	H	A	R	G	A	F	T	G	A	V	S	N
Query Conservation
Alig confidence																																													.	.	.
Template Conservation																																													.	.	.
Template Sequence		T	E	A	I	K	M	A	R	A	G	L	G	H	E	H	K	P	V	G	S	F	L	F	A	G	P	T	G	V	G	K	T	E	V	T	V	Q	L	S	K	A	L	G	.	.	.	I	E	L	L	R	F	D	M	S	E	Y	M	E	R	H	T	V	S	R	L	I	G	A	P	P	G	Y	V	G	F	D	Q	G	G
Template Known Secondary structure										T	T		S		T	T	S		S								S	T	T	S	S													T	.	.	.								G	G	G		S	S	S	S			S	S	S					S		S						T	T
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.				.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
		220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure			.																																																										.	.
Query SS confidence			.																																																										.	.
Query Sequence		R	.	E	G	L	F	Q	A	A	E	G	G	T	L	F	L	D	E	I	G	D	M	P	A	P	L	Q	V	K	L	L	R	V	L	Q	E	R	K	V	R	P	L	G	S	N	R	D	I	D	I	N	V	R	I	I	S	A	T	H	.	.	R	D	L	P	K	A	M	A	R	G	E	F	R	E	D	L	Y	Y	R
Query Conservation			.																																																										.	.
Alig confidence			.																																																										.	.										.
Template Conservation																																																																								.
Template Sequence		L	L	T	D	A	V	I	K	H	P	H	A	V	L	L	L	D	E	I	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	M	D	N	G	T	L	T	D	N	N	G	R	K	A	D	F	R	N	V	V	L	V	M	T	T	N	A	G	V	R	A	M	E	E	I	K	K	.	I	F	T	P	E	F	R	N	R
Template Known Secondary structure											S	S							T	G	G	G	S															S					T	T	T						T	T									S	S										.		S						T	T
Template Predicted Secondary structure																																																																								.
Template SS confidence
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.		.	.	620	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure																																									.	.												.	.
Query SS confidence																																									.	.												.	.
Query Sequence		L	N	V	V	S	L	K	I	P	A	L	A	E	R	T	E	D	I	P	L	L	A	N	H	L	L	R	Q	A	A	E	R	H	K	P	F	V	R	A	.	.	F	S	T	D	A	M	K	R	L	M	T	.	.	A	S	W	P	G	N	V	R	Q	L	V	N	V	I	E	Q	C	V
Query Conservation																																									.	.												.	.
Alig confidence						.							.	.																											.	.												.	.
Template Conservation						.							.	.
Template Sequence		L	D	N	I	.	I	W	F	D	H	L	.	.	S	T	D	V	I	H	Q	V	V	D	K	F	I	V	E	L	Q	V	Q	L	D	Q	K	G	V	S	L	E	V	S	Q	E	A	R	N	W	L	A	E	K	G	Y	D	R	A	M	G	A	R	P	M	A	R	V	I	Q	D	N	L
Template Known Secondary structure			S			.							.	.																							T	T																			B	T	T	T	B	T	T	T
Template Predicted Secondary structure						.							.	.
Template SS confidence
		644	.	.	.		.	.	650	.	.	.			.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions