Job Description P0AFU4 Confidence 99.77% Date Thu Jan 5 11:27:17 GMT 2012 Rank 110 Aligned Residues 216 % Identity 19% Template c1qvrB_ PDB info PDB header:chaperone Chain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb Resolution 3.00 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.								160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.
Query Sequence		E	A	I	V	T	R	S	P	L	M	L	R	L	L	E	Q	A	R	L	V	A	Q	S	D	V	S	.	.	.	.	.	.	.	V	L	I	N	G	Q	S	G	T	G	K	E	I	F	A	Q	A	I	H	N	A	S	P	R	N	S	K	P	F	I	A	I	N	C	G	A	L	P	E	Q	L	L	E	S	E	L	F
Query Conservation																												.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	V	V	G	Q	D	E	A	I	R	A	V	A	D	A	I	R	R	A	R	A	G	L	K	D	P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	A	K	T	L	A	A	T	L	F	D	T	E	E	A	M	I	R	I	D	M	T	E	Y	M	E	K	H	A	V	S	R	L	Q
Template Known Secondary structure		T	T	S		S																G	G	G	T	S		S	S	S		S						B	S	S	S	S	S	S														S	S	G	G	G						T	T	T			S	S	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		G	H	A	R	G	A	F	T	G	A	V	S	N	R	E	G	L	F	Q	A	A	E	G	G	T	L	F	L	D	E	I	G	D	M	P	A	P	L	Q	V	K	L	L	R	V	L	Q	E	R	K	V	R	P	L	G	S	N	R	D	I	D	I	N	V	R	I	I	S	A	T	H	R	D	L	P	K	A	M	A	.
Query Conservation																																																																																	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																																																																.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	R	R	R	P	Y	S	V	I	L	F	D	E	I	E	K	A	H	P	D	V	F	N	I	L	L	Q	I	L	D	D	G	R	L	T	D	S	H	G	R	T	V	D	F	R	N	T	V	I	I	L	T	S	N	L	G	S	P	L	I	L	E	G
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.						S	S						S	S	G	G	G	S													T	T	T					S	S	S						T	T									T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		652	.	.														.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
																				286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	E	F	R	E	D	L	Y	Y	R	L	N	V	V	S	L	K	I	P	A	L	A	E	R	T	E	D	I	P	L	L	A	N	H	L	L	R	Q	A	A	E	R	H	K	P	F	V	R	A	.	.	F	S	T	D	A	M	K	R	L	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.									.	.																									.	.
Template Conservation																																			.									.	.
Template Sequence		L	Q	K	G	W	P	Y	E	R	I	R	D	E	V	F	K	V	L	Q	Q	H	F	R	P	E	F	L	N	R	L	D	E	I	.	V	V	F	R	P	L	T	K	.	.	E	Q	I	R	Q	I	V	E	I	Q	L	S	Y	L	R	A	R	L	A	E	K	R	I	S	L	E	L	T	E	A	A	K	D	F	L	A
Template Known Secondary structure				T	T															T	T	T	S							T		S	B		.		B							.	.																				T	T	T
Template Predicted Secondary structure																																			.									.	.
Template SS confidence
		719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.		.	.	.	.	.	.	.	.			760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.
				346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	T	A	S	W	P	G	N	V	R	Q	L	V	N	V	I	E	Q	C	V	A
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		E	R	G	Y	D	P	V	F	G	A	R	P	L	R	R	V	I	Q	R	E	L	E
Template Known Secondary structure						B	T	T	T	B	T	S										T
Template Predicted Secondary structure
Template SS confidence
		796	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions