Job Description P0AFU4 Confidence 98.54% Date Thu Jan 5 11:27:17 GMT 2012 Rank 198 Aligned Residues 211 % Identity 20% Template c1iqpF_ PDB info PDB header:replication Chain: F: PDB Molecule:rfcs; PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus Resolution 2.80 Å

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		I	D	D	A	L	E	Q	S	A	P	A	T	D	E	R	W	R	E	A	I	V	T	R	S	P	L	M	L	R	L	L	E	Q	A	R	L	V	A	Q	S	D	V	S	V	L	I	N	G	Q	S	G	T	G	K	E	I	F	A	Q	A	I	H	N	A	.	.	S	P	R	N	S	K	P	F	I	A	I	N	C	G
Query Conservation																																																																		.	.
Alig confidence																																					.	.																												.	.
Template Conservation																																					.	.
Template Sequence		V	K	V	L	E	K	P	W	V	E	K	Y	R	P	Q	R	L	D	D	I	V	G	Q	E	H	I	V	K	R	L	K	H	Y	V	K	.	.	T	G	S	M	P	H	L	L	F	A	G	P	P	G	V	G	K	T	T	A	A	L	A	L	A	R	E	L	F	G	E	N	W	R	H	N	F	L	E	L	N	A	S
Template Known Secondary structure				T	T	S	S		G	G	G	T	S				S	G	G	G			S													T	.	.	T	T									S		T	T	S	S	T	T												G	G	G										T	T
Template Predicted Secondary structure																																					.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	P	E	Q	L	L	E	S	E	L	F	G	H	A	R	G	A	F	T	G	A	V	S	N	R	E	G	L	F	Q	A	A	E	G	G	T	L	F	L	D	E	I	G	D	M	P	A	P	L	Q	V	K	L	L	R	V	L	Q	E	R	K	V	R	P	L	G	S	N	R	D	I	D	I	N	V	R	I	I	S
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	R	G	I	N	V	I	R	E	K	V	K	E	F	.	.	.	.	.	.	.	.	.	A	R	T	K	P	I	G	G	A	S	F	K	I	I	F	L	D	E	A	D	A	L	T	Q	D	A	Q	Q	A	L	R	R	T	M	E	M	F	S	.	.	.	.	.	.	.	.	.	.	.	S	N	V	R	F	I	L
Template Known Secondary structure		T	S	S													.	.	.	.	.	.	.	.	.	T	T	S			S	S	S		S								T	G	G	G	S															T	T	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100										.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.												.	140	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	H	R	D	L	P	K	A	M	A	R	G	E	F	R	E	D	L	Y	Y	R	L	N	V	V	S	L	K	I	P	A	L	A	E	R	T	E	D	I	P	L	L	A	N	H	L	L	R	Q	A	A	E	R	H	K	P	F	V	R	A	F	S	T	D	A	M	K	R	L	M	T	A	S	W	P	G	N	V	R
Query Conservation
Alig confidence						.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																		.	.	.															.
Template Conservation						.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																		.	.	.															.
Template Sequence		S	C	N	Y	.	.	.	.	.	.	.	S	S	K	I	I	E	P	I	Q	S	R	C	A	I	F	R	F	R	P	L	R	.	.	.	.	.	.	.	.	D	E	D	I	A	K	R	L	R	Y	I	A	E	N	E	G	L	.	.	.	E	L	T	E	E	G	L	Q	A	I	L	Y	I	A	.	E	G	D	M	R
Template Known Secondary structure				S		.	.	.	.	.	.	.	G	G	G	S						T	T											.	.	.	.	.	.	.	.																T		.	.	.															.	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.																		.	.	.															.
Template SS confidence
		146	.	.	.								150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170									.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	V	N	V	I	E	Q	C	V	A	L	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	I	N	I	L	Q	A	A	A	A	L	D	K
Template Known Secondary structure												T	T		S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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