Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFU4
Confidence93.30%DateThu Jan 5 11:27:17 GMT 2012
Rank275Aligned Residues41
% Identity17%Templatec1i1gA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulator lrpa; PDBTitle: crystal structure of the lrp-like transcriptional regulator from the2 archaeon pyrococcus furiosus
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   395....400.........410.........420.........430.....
Predicted Secondary structure 






Query SS confidence 








































Query Sequence  RNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRH
Query Conservation 
   

  
  

    

   

  




 

 



  
Alig confidence 








































Template Conservation 

  
  

  
  
 
 
   

  



  

  

  
Template Sequence  IDERDKIILEILEKDARTPFTEIAKKLGISETAVRKRVKAL
Template Known Secondary structure 

S
TT

TS
Template Predicted Secondary structure 









Template SS confidence 








































   2.......10.........20.........30.........40..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions