Job Description P0AFU4 Confidence 98.85% Date Thu Jan 5 11:27:17 GMT 2012 Rank 179 Aligned Residues 245 % Identity 12% Template c1fnnB_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:cell division control protein 6; PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum Resolution 2.00 Å

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		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																			.	.	.	.																											.
Query SS confidence																																			.	.	.	.																											.
Query Sequence		D	A	L	E	Q	S	A	P	A	T	D	E	R	W	R	E	A	I	V	T	R	S	P	L	M	L	R	L	L	E	Q	A	R	.	.	.	.	L	V	A	Q	S	D	V	S	V	L	I	N	G	Q	S	G	T	G	K	E	I	F	A	Q	A	I	.	H	N	A	S	P	R	N	S	K	P	F	I	A	I	N	C
Query Conservation																																			.	.	.	.																											.
Alig confidence																																			.	.	.	.																											.
Template Conservation
Template Sequence		A	I	V	V	D	D	S	V	F	S	P	S	Y	V	P	K	R	L	P	H	R	E	Q	Q	L	Q	Q	L	D	I	L	L	G	N	W	L	R	N	P	G	H	H	Y	P	R	A	T	L	L	G	R	P	G	T	G	K	T	V	T	L	R	K	L	W	E	L	Y	K	D	K	T	T	A	R	F	V	Y	I	N	G
Template Known Secondary structure				B	S		G	G	G	G	S	T	T				S			T	T																		S		B	S	S										T	T	S	S													T	T	S										T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.										.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.
Query Sequence		G	A	L	P	E	Q	L	L	E	S	E	L	F	G	H	A	R	G	A	F	T	G	A	V	S	N	R	E	.	.	.	.	.	.	.	.	.	G	L	F	Q	A	A	E	G	G	T	L	F	L	D	E	I	G	D	M	P	A	P	L	Q	V	K	L	L	R	V	L	Q	E	R	K	V	R	P	L	G	S	N	R
Query Conservation																														.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.
Template Sequence		F	I	Y	R	N	F	T	A	I	I	G	E	I	A	R	S	L	N	I	P	F	P	R	R	G	L	S	R	D	E	F	L	A	L	L	V	E	H	L	R	E	R	D	L	Y	M	F	L	V	L	D	D	A	F	N	L	A	P	D	I	L	S	T	F	I	R	L	G	Q	E	A	D	.	.	.	.	.	.	.	K
Template Known Secondary structure		T	T			S													T					S	S																		T	T									T	G	G	G	S												T	T				.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.								.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	D	I	N	V	R	I	I	S	A	T	H	R	D	L	P	K	A	M	A	R	G	E	F	R	E	D	L	Y	Y	R	L	N	V	V	S	L	K	I	P	A	L	A	E	R	T	E	D	I	P	L	L	A	N	H	L	L	R	Q	A	A	E	R	H	K	P	F	V	R	A	F	S	T	D	A	M	K	R	L
Query Conservation
Alig confidence																					.	.	.	.																									.	.	.	.	.	.																		.
Template Conservation																					.	.	.	.																									.	.	.	.	.	.																		.
Template Sequence		L	G	A	F	R	I	A	L	V	I	V	G	H	N	D	A	V	L	N	.	.	.	.	N	L	D	P	S	T	R	G	I	M	G	K	Y	V	I	R	F	S	P	Y	T	K	D	Q	.	.	.	.	.	.	I	F	D	I	L	L	D	R	A	K	A	G	L	A	E	G	S	.	Y	S	E	D	I	L	Q	M	I
Template Known Secondary structure			S	S	B									S	S	T					.	.	.	.	T	S									T	T									B				.	.	.	.	.	.													B		T	T	S	.	S
Template Predicted Secondary structure																					.	.	.	.																									.	.	.	.	.	.																		.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.							.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.
										345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.				.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																								.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																								.	.	.
Query Sequence		.	.	.	.	.	.	.	.	M	T	A	S	W	P	G	N	V	R	Q	L	V	N	V	I	E	Q	C	V	A	L	T	.	.	.	S	S	P	V	I	S	D	A	L	V	E	Q	A	L
Query Conservation		.	.	.	.	.	.	.	.																								.	.	.
Alig confidence		.	.	.	.	.	.	.	.																								.	.	.
Template Conservation
Template Sequence		A	D	I	T	G	A	Q	T	P	L	D	T	N	R	G	D	A	R	L	A	I	D	I	L	Y	R	S	A	Y	A	A	Q	Q	N	G	R	K	H	I	A	P	E	D	V	R	K	S	S
Template Known Secondary structure						S	B	S	S	T	T		T	T																					T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions