 |
Job Description | P76510 | Confidence | 59.11% | Date | Thu Jan 5 12:23:50 GMT 2012 |
Rank | 107 | Aligned Residues | 47 |
% Identity | 17% | Template | d6paxa1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Paired domain
|
Resolution | 2.50 |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | M | S | L | L | N | D | V | Q | K | F | I | E | A | H | P | G | C | T | S | G | D | I | A | D | A | F | A | G | Y | S | R | Q | R | V | L | Q | S | A | S | K | L | R | Q | S | G | R | V | A |
Query Conservation |   |
|
|
|   |
|   |   |   |   |
|   |
|
|   |   |
|
|   |
|
|   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |
|
|
|   |
|   |   | . | . |   |
|   |
|   |   |   |
|
|
|
|
| . |   |
|
|   |
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|   |
Template Sequence |   |
L | P | D | S | T | R | Q | R | I | V | E | L | A | H | . |
. |
S | G | A | R | P | C | D | I | S | R | I | L | . |
Q | V | S | N | G | C | V | S | K | I | L | G | R | Y | Y | A | T | G | S | I | R |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | T | T |
|
|  |  |  |  |  |  |  |  | . | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
. | . | . | . | . | . | . | . | 40 | . | . | . | |
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|