 |
Job Description | P76510 | Confidence | 87.73% | Date | Thu Jan 5 12:23:50 GMT 2012 |
Rank | 30 | Aligned Residues | 55 |
% Identity | 22% | Template | d1r1ta_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| ArsR-like transcriptional regulators
|
Resolution | 1.70 |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | N | D | V | Q | K | F | I | E | A | H | P | G | C | T | S | G | D | I | A | D | A | F | A | G | Y | S | R | Q | R | V | L | Q | S | A | S | K | L | R | Q | S | G | R | V | A | H | R | C | E | G | D | T | H | R | H | F |
Query Conservation |   |
|   |   |   |   |
|   |
|
|   |   |
|
|   |
|
|   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |
|   |   |
|   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |   |
|   |   |   |   | . |   |   |
|   |
|
|
|   |   |
| . |   |
|
|   |   |
|
|
|   |
|
|   |   |
|   |   |
|
|
|
|   |   |   |
|   |
|
|   |   |   |
|   |
Template Sequence |   |
N | R | L | R | L | L | S | L | L | A | R | S | E | . |
L | C | V | G | D | L | A | Q | A | I | . |
G | V | S | E | S | A | V | S | H | Q | L | R | S | L | R | N | L | R | L | V | S | Y | R | K | Q | G | R | H | V | Y | Y | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
| . | B |
|  |  |  |  |  |  |  |  | . | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
47 | . | . | 50 | . | . | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|