Job Description P76510 Confidence 69.87% Date Thu Jan 5 12:23:50 GMT 2012 Rank 81 Aligned Residues 91 % Identity 13% Template d1pdnc_ SCOP info DNA/RNA-binding 3-helical bundle Homeodomain-like Paired domain Resolution 2.50

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	M	S	L	L	N	D	V	Q	K	F	I	E	A	H	P	G	C	T	S	G	D	I	A	D	A	F	A	G	Y	S	R	Q	R	V	L	Q	S	A	S	K	L	R	Q	S	G	R	V	A	H	R	C	E	G	D	T	H	R	H	F	P	R	L	T	E	R	A	Q	D	P	E	P	Q	P	V	R	E	T	R
Query Conservation
Alig confidence																	.	.												.																																			.	.	.	.	.	.
Template Conservation																	.	.												.																																			.	.	.	.	.	.
Template Sequence		L	P	N	N	I	R	L	K	I	V	E	M	A	A	D	.	.	G	I	R	P	C	V	I	S	R	Q	L	.	R	V	S	H	G	C	V	S	K	I	L	N	R	Y	Q	E	T	G	S	I	R	P	G	V	I	G	G	S	K	P	R	I	A	T	.	.	.	.	.	.	P	E	I	E	N	R	I	E	E	Y	K
Template Known Secondary structure																T	.	.	T											.	T																			S	S					S						S	S		.	.	.	.	.	.	S	T								T	T
Template Predicted Secondary structure																	.	.												.																																			.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.							.	.	80	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	R	N	F	Y	V	G	T	N	D	P	R	V	I	L	C	L	T	R	Q	A	E	E	L	E	S	R	G	L
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.
Template Sequence		R	S	S	P	G	.	.	.	.	.	.	.	.	.	.	M	F	S	W	E	I	R	E	K	L	I	R	E	G	V
Template Known Secondary structure		T	T		T	T	.	.	.	.	.	.	.	.	.	.													T	S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.											.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions