 |
Job Description | P76510 | Confidence | 54.80% | Date | Thu Jan 5 12:23:50 GMT 2012 |
Rank | 117 | Aligned Residues | 48 |
% Identity | 23% | Template | c2ia2D_ |
PDB info |
PDB header:transcription | Chain: D: PDB Molecule:putative transcriptional regulator; |
PDBTitle: the crystal structure of a putative transcriptional regulator rha061952 from rhodococcus sp. rha1
|
Resolution | 2.10 Å |
|
  |   |
3 | . | . | . | . | . | . | 10 | . | |
|
|
|
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | L | L | N | D | V | Q | K | . |
. |
. |
. |
F | I | E | A | H | P | G | C | T | S | G | D | I | A | D | A | F | A | G | Y | S | R | Q | R | V | L | Q | S | A | S | K | L | R | Q | S | G | R | V | A | H |
Query Conservation |   |
|   |
|   |   |   |   |
|   | . | . | . | . |
|
|   |   |
|
|   |
|
|   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |
|
|   |
|
|
|   |   |
| . |   |
|   |   |
|
|   |   |
|
|
|   |
|
|   |   |   |
|   |   |   |
|
Template Sequence |   |
V | Q | S | L | A | R | G | L | A | V | I | R | C | F | D | H | R | N | Q | R | R | T | L | S | D | V | A | R | A | T | . |
D | L | T | R | A | T | A | R | R | F | L | L | T | L | V | E | L | G | Y | V | A | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
| S | S |
|
|  |  |
|  |  |  |  |  |  |  |  | . | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | B |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|