Return to main results Retrieve Phyre Job Id

Job DescriptionP21420
Confidence93.82%DateThu Jan 5 11:38:19 GMT 2012
Rank34Aligned Residues199
% Identity8%Templated1uynx_
SCOP infoTransmembrane beta-barrels Autotransporter Autotransporter
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VATYRNNDFFGLVDGLNFAAQYQGKNDRSDFDNYTEGNGDGFGFSATYEYEG. . . FGIGATYAKSDRTDTQVNAGKVLPE
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Template Sequence  TVGIAAKTGENTTAAATLGMG. . . RSTWSENSANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAE
Template Known Secondary structure  TT...TTTTT
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Query Sequence  VFASGKNAEVWAAGLKYDANNI. . . . YLATTYSETQNMTVFADHFVANKA. . . . . . . . . . QNFEAVAQYQFDFGLRP. . S
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Template Sequence  GSVNGTL. MQLGALGGVNVPTGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSLTEGTLVGLAGLKLSQPLSDKAVLFAT
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Query Sequence  VAYLQSKGKDLGVWGDQDLVKYVDVGATYYFNKNMSTFVDYKINLLDKNDFTKALGVSTDDIVAVGLVYQF
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Template Sequence  AGVERDLNGRDYTVTGPHTRLVAGLGADVEFGNGWNGLARYSYAGSKQ. . . . . . . . . YGNHSGRVGVGYRF
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   1006...1010.........1020.........1030.........1040.........1050... ......1060.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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