Return to main results Retrieve Phyre Job Id

Job DescriptionP21420
Confidence100.00%DateThu Jan 5 11:38:19 GMT 2012
Rank1Aligned Residues334
% Identity68%Templated1osma_
SCOP infoTransmembrane beta-barrels Porins Porin
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
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Query Sequence  AEIYNKDSNKLDLYGKVNAKHYFSSNDADDGDTTYARLGFKGETQINDQLTGFGQWEYEFKGNRAESQGSSKDKTRLAFA
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Template Sequence  AEIYNKDGNKLDLYGKIDGLHYFSDDKDVDGDQTYMRLGVKGETQINDQLTGYGQWEYNVQANNTESS. SDQAWTRLAFA
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TTSSTTT



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   1........10.........20.........30.........40.........50.........60........ .70.........
 
   104.....110.........120.........130.........140.........150.........160.........170.........180...
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Query Sequence  GLKFGDYGSIDYGRNYGVAYDIGAWTDVLPEFGGDTWTQTDVFMTQRATGVATYRNNDFFGLVDGLNFAAQYQGKNDRSD
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Template Sequence  GLKFGDAGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDN. FLQSRANGVATYRNSDFFGLVDGLNFALQYQGKNGSVS
Template Known Secondary structure 
TTS

TTGGG


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   87..90.........100.........110.........120....... ..130.........140.........150.........160.....
 
   184.....190... ......200..... ....210.........220.........230.........240.........250.....
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Query Sequence  FDNYTEGNGD. . . . . . . GFGFSATYEYEG. FGIGATYAKSDRTDTQVNAGKVLPEVFASGKNAEVWAAGLKYDANNIYLA
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Template Sequence  GEGATNNGRGALKQNGDGFGTSVTYDIFDGISAGFAYANSKRTDDQ. . . . . . NQLLLGEGDHAETYTGGLKYDANNIYLA
Template Known Secondary structure  TTT

TT


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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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