Job Description P21420 Confidence 96.27% Date Thu Jan 5 11:38:19 GMT 2012 Rank 29 Aligned Residues 291 % Identity 10% Template d1a0tp_ SCOP info Transmembrane beta-barrels Porins Maltoporin-like Resolution 2.40

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		N	K	L	D	L	Y	G	K	V	N	A	K	H	Y	F	S	S	N	D	A	D	D	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	Y	A	R	L	G	F	K	G	E	T	Q	I	N	D	Q	.	.	L	T	G	F	G	Q	W	E	Y	E	F	K	G	N	R	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		S	G	F	E	F	H	G	Y	A	R	S	G	V	I	M	N	D	S	G	A	S	T	K	S	G	A	Y	I	T	P	A	G	E	T	G	G	A	I	G	R	L	G	N	Q	A	D	T	Y	V	E	M	N	L	E	H	K	Q	T	L	D	N	G	A	T	T	R	F	K	V	M	V	A	D	G	Q	T	S	Y	N	D
Template Known Secondary structure																		T	T	S	S						T	T		S	G	G	G	G	G	T						T	T				S														T	T	S																	S	S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																						.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.
Query Sequence		E	S	Q	G	S	S	K	D	K	T	R	L	A	F	A	G	L	K	F	G	.	.	.	.	.	.	.	D	Y	G	S	I	D	Y	G	R	N	Y	G	V	A	Y	D	I	G	A	W	T	D	V	L	P	E	F	G	G	D	T	W	T	Q	T	D	V	F	M	T	Q	R	A	T	G	V	A	T	Y	R	N	N	D
Query Conservation																						.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	T	A	S	T	S	D	L	N	V	R	Q	A	F	V	E	L	G	N	L	P	T	F	A	G	P	F	K	G	S	T	L	W	A	G	K	R	F	D	R	D	N	F	D	I	H	W	I	D	S	D	V	V	F	L	A	G	T	G	G	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	V	K
Template Known Secondary structure				G	G	G														S		T	T			G	G	G	T	T											T	T					G	G	G	T					B									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.															.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	G	L	V	D	G	L	N	F	A	A	Q	Y	Q	G	K	N	D	R	S	D	F	D	N	Y	T	E	G	N	G	D	G	F	G	F	S	A	T	Y	E	Y	E	G	F	G	I	G	A	T	Y	A	K	S	D	R	T	D	T	Q	V	N	A	G	K	V	L	P	E	V	F	A	S	G	K	N	A	E	V	W
Query Conservation
Alig confidence																												.	.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		W	N	D	G	L	R	S	N	F	S	L	Y	G	R	N	F	G	D	I	D	D	S	S	N	S	V	.	.	.	.	.	Q	N	Y	I	L	T	M	N	H	F	A	G	P	L	Q	M	M	V	S	G	L	R	A	K	D	N	D	E	R	K	D	S	N	G	N	L	A	K	G	D	A	A	N	T	G	V	H	A	L
Template Known Secondary structure			T	T	T															T	T		G	G	G			.	.	.	.	.												T	T											T	T	G	G	G		B		S	S	S	S	B	S		S	S			S
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.						.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		242	.	.	.	.	.	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure													.	.	.	.	.											.	.	.	.	.
Query SS confidence													.	.	.	.	.											.	.	.	.	.
Query Sequence		A	A	G	L	K	Y	D	A	N	N	I	.	.	.	.	.	Y	L	A	T	T	Y	S	E	T	Q	.	.	.	.	.	N	M	T	V	F	A	D	H	F	V	A	N	K	A	Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	V	A	Y	L	Q	S	K	G	K	D	L	G	V	W	G	D	Q
Query Conservation													.	.	.	.	.											.	.	.	.	.
Alig confidence													.	.	.	.	.											.	.	.	.	.
Template Conservation
Template Sequence		L	G	L	H	N	D	S	F	Y	G	L	R	D	G	S	S	K	T	A	L	L	Y	G	H	G	L	G	A	E	V	K	G	I	G	S	D	G	A	L	R	P	G	A	D	T	W	R	I	A	S	Y	G	T	T	P	L	S	E	N	W	S	V	A	P	A	M	L	A	Q	R	S	K	D	R	Y	A	D	G	D	S
Template Known Secondary structure									S	T	T	S	S														T	T		S		S	B	T	T			T	T			T	T														S	S	S	S														S	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	V	K	Y	V	D	V	G	A	T	Y	Y	F	N	K	N	M	S	T	F	V	D	Y	K	I	N	L	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Q	W	A	T	F	N	L	R	L	I	Q	A	I	N	Q	N	F	A	L	A	Y	E	G	S	Y	Q	Y	M	D
Template Known Secondary structure															S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions