Job Description P21420 Confidence 95.15% Date Thu Jan 5 11:38:19 GMT 2012 Rank 30 Aligned Residues 79 % Identity 11% Template c3qq2C_ PDB info PDB header:membrane protein/protein transport Chain: C: PDB Molecule:brka autotransporter; PDBTitle: crystal structure of the beta domain of the bordetella autotransporter2 brka Resolution 3.00 Å

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		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		F	E	A	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	V	.	A	Y	L	Q	S	K	G	K	D	L	G	V	W	G	D	Q	D	L	V	K	Y	V	D	V	G	A	T	Y	Y	F	N	K	N	M	S	T	F	V	D	Y	K	I	N	L	L	D	K	N	D	F	T	K	A	L	G	V	S	T	D	D	I	V
Query Conservation																			.
Alig confidence																			.																																																.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.
Template Sequence		L	G	L	R	F	G	R	R	I	A	L	A	G	G	N	I	V	Q	P	Y	A	R	L	G	W	T	Q	E	F	K	S	T	G	R	H	G	R	V	E	L	G	A	G	V	D	A	A	L	G	K	G	H	N	L	Y	A	S	Y	E	Y	A	A	G	D	R	.	.	.	.	.	.	.	.	I	N	I	P	W	S	F
Template Known Secondary structure													T	T	S																					B														G	G	G	B												S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.
Template SS confidence
		918	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.									.	.	.	.	.	.	.
		358	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	G	L	V	Y	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	A	G	Y	R	Y	S	F
Template Known Secondary structure							B
Template Predicted Secondary structure
Template SS confidence
		1003	.	.	.	.	.	.	1010

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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