Job Description P21420 Confidence 97.75% Date Thu Jan 5 11:38:19 GMT 2012 Rank 19 Aligned Residues 149 % Identity 13% Template c2lhfA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein h1; PDBTitle: solution structure of outer membrane protein h (oprh) from p.2 aeruginosa in dhpc micelles Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		A	K	S	D	R	T	D	T	Q	V	N	A	G	K	V	L	P	E	V	F	A	S	G	K	N	A	E	V	W	A	A	G	L	K	Y	D	A	N	N	I	Y	L	A	T	T	Y	S	E	T	Q	N	M	T	V	F	A	D	H	F	V	A	N	K	A	Q	N	F	E	A	V	A	Q	Y	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.												.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.
Template Sequence		S	N	N	I	Q	K	S	K	S	L	N	R	N	L	N	S	P	N	L	D	K	V	I	D	N	T	G	T	W	G	I	R	A	G	Q	Q	F	E	Q	G	R	Y	Y	A	T	Y	E	N	I	S	D	T	S	S	G	N	K	L	.	.	.	.	R	Q	Q	N	L	L	G	S	Y	D	A	F	L	P	I	G	D	N
Template Known Secondary structure										S		S	S									S				S	S												T	T														S	S			S		.	.	.	.														B		S	S	S
Template Predicted Secondary structure																																																												.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.									.	.	.
Predicted Secondary structure																							.	.																																															.	.	.	.	.	.	.	.
Query SS confidence																							.	.																																															.	.	.	.	.	.	.	.
Query Sequence		Q	F	D	F	G	L	R	P	S	V	A	Y	L	Q	S	K	G	K	D	L	G	.	.	V	W	G	D	Q	D	L	V	K	Y	V	D	V	G	A	T	Y	Y	F	N	K	N	M	S	T	F	V	D	Y	K	I	N	L	L	D	K	N	D	F	T	K	A	L	G	V	S	.	.	.	.	.	.	.	.	T	D	D
Query Conservation																							.	.																																															.	.	.	.	.	.	.	.
Alig confidence																							.	.																																															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	T	K	L	F	G	G	A	T	L	G	L	V	K	L	E	Q	D	G	K	G	F	K	R	D	S	D	V	G	Y	A	A	G	L	Q	A	G	I	L	Q	E	L	S	K	N	A	S	I	E	G	G	Y	R	Y	L	R	T	N	A	S	T	E	M	T	P	H	G	G	N	K	L	G	S	L	D	L	H	S	S	S
Template Known Secondary structure		S		B															S		S	S	S																					S	S	S																S		S	S								S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		356	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	A	V	G	L	V	Y	Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	F	Y	L	G	A	N	Y	K	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions