Job Description P21420 Confidence 97.60% Date Thu Jan 5 11:38:19 GMT 2012 Rank 20 Aligned Residues 154 % Identity 17% Template c2f1tB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw Resolution 3.00 Å

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.									.	.	.
Query SS confidence																																																				.									.	.	.
Query Sequence		E	Y	E	G	F	G	I	G	A	T	Y	A	K	S	D	R	T	D	T	Q	V	N	A	G	K	V	L	P	E	V	F	A	S	G	K	N	A	E	V	W	A	A	G	L	K	Y	D	A	N	N	.	I	Y	L	A	T	T	Y	S	.	.	.	E	T	Q	N	M	T	V	F	A	D	H	F	V	A	N	K	A	Q
Query Conservation																																																				.									.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																							.									.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	G	E	F	F	M	R	A	G	S	A	T	V	R	P	T	E	.	.	.	.	.	.	.	.	.	.	G	G	G	F	S	V	T	N	N	T	Q	L	G	L	T	F	T	Y	M	A	T	D	N	I	G	V	E	L	L	A	A	T	P	F	R	H	K	I	G	T	R	A	T	G	D	I	A	T	V	H	H	L
Template Known Secondary structure			T	T																.	.	.	.	.	.	.	.	.	.																						T	T									S									T	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.											20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		278	.	280	.	.	.	.	.								.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.											.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure										.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Query Sequence		N	F	E	A	V	A	Q	Y	.	.	.	.	.	.	.	Q	F	D	F	G	L	R	P	S	V	A	Y	L	Q	S	K	G	K	D	L	G	V	.	.	.	.	.	.	.	.	.	.	W	G	D	Q	D	L	V	K	Y	V	D	V	G	A	T	Y	Y	F	N	K	N	M	S	T	F	V	D	Y	K	I	N	L	L
Query Conservation										.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	P	T	L	M	A	Q	W	Y	F	G	D	A	S	S	K	F	R	P	Y	V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D	H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	V	D	Y	L	I	N	R	D	W	L	V	N	M	S	V	W	Y	M	D	I
Template Known Secondary structure												S		T	T		S																										T	T																							S	S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350								.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		D	K	N	D	F	T	K	A	L	G	.	.	.	.	.	.	.	V	S	T	D	D	I	V	A	V	G	L	V	Y	Q	F
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	T	A	N	Y	K	L	G	G	A	Q	Q	H	D	S	V	R	L	D	P	W	V	F	M	F	S	A	G	Y	R	F
Template Known Secondary structure										S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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