Return to main results Retrieve Phyre Job Id

Job DescriptionP37760
Confidence99.94%DateThu Jan 5 11:57:33 GMT 2012
Rank67Aligned Residues276
% Identity12%Templated1xgka_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30..... ....40.........50.........60......
Predicted Secondary structure 











...............
















Query SS confidence 

































. . . . . . . . . . . . . . .






























Query Sequence  NILLFGKTGQVGWELQRALAPLGNLIAFDVHSTD. . . . . . . . . . . . . . . YCGDFSNPEGVAETVRSIRPDIIVNAAAHTA
Query Conservation 








 

  
   
   
  
    
   ...............   

 
             
 


 

   
Alig confidence 

































...............

















..










Template Conservation   







 

  
   

  
  
    
               
  
  
  
           ..           
Template Sequence  TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEG. . AHLAFINTTSQ
Template Known Secondary structure 
STTSTT

S
S
STSTTS

TT
TT..
S


ST
Template Predicted Secondary structure 

























..





Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60.........70... ......80....
 
   67..70.........80.........90.........100.........110.........120.........130.........140......
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  VDKAESEPEFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETDATAPLNVYGETKLAGEKALQEYCAKH
Query Conservation                                                                                  
Alig confidence 


...........



























........





























Template Conservation     ...........          

   
    
  

   ........               
   
  
       
Template Sequence  AGD. . . . . . . . . . . EIAIGKDLADAAKRAGTIQHYIYSSMPD. . . . . . . . HSLYGPWPAVPMWAPKFTVENYVRQLGLPS
Template Known Secondary structure  TS
...........S

S


........GGGTSS



TTTTSSS
Template Predicted Secondary structure 

...........








........












Template SS confidence 















































































   85.. ..90.........100.........110..... ....120.........130.........140.....
 
   147..150.........160.........170......... 180.........190.........200.........210.........220..
Predicted Secondary structure 











....



















Query SS confidence 
































. . . .










































Query Sequence  LIFRTSWVYAGKGNNFAKTMLRLAKEREELAVI. . . . NDQFGAPTGAELLADCTAHAIRVALNKPDVAGLYHLVASGTTT
Query Conservation     
   
 
                       ....           
                      

      
Alig confidence 
































....





















.



















Template Conservation    

                                        
   
     
   
.                   
Template Sequence  TFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIF. KDGPQKWNGHRIALTFETLS
Template Known Secondary structure 
GGG
BSSS
SS
B
TTS
SS
TTS

.
TT

S
Template Predicted Secondary structure 




















.














Template SS confidence 















































































   146...150.........160.........170.........180.........190.........200.... .....210.........220....
 
   223......230.........240........ .250.........260.........270.........280
Predicted Secondary structure 













......................
















Query SS confidence 

























. . . . . . . . . . . . . . . . . . . . . .































Query Sequence  WYDYAALVFEEARKAGIPLALNKLNA. . . . . . . . . . . . . . . . . . . . . . VPTTAYPTPARRPHNSRLNTEKFQQNFALVLP
Query Conservation    
    
    
             ......................                  
  
    

  
 
Alig confidence 

























......................































Template Conservation    
         
        
                                                    
     
Template Sequence  PVQVCAAFSRALNRRVTYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFPLPEFSPGGVISQRVTDEARKLWSGWR
Template Known Secondary structure  TS

SS



S


TTS


SS
SGGG

TT




TT
TT

Template Predicted Secondary structure 



































Template SS confidence 















































































   225....230.........240.........250.........260.........270.........280.........290.........300....
 
   281........290.........
Predicted Secondary structure 



Query SS confidence 


















Query Sequence  DWQVGVKRMLNELFTTTAI
Query Conservation     
 
      
     
Alig confidence 


















Template Conservation    

  

           
Template Sequence  DMEEYAREVFPIEEEANGL
Template Known Secondary structure 
TTT
Template Predicted Secondary structure 



Template SS confidence 


















   330.........340........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions