Return to main results Retrieve Phyre Job Id

Job DescriptionP37760
Confidence100.00%DateThu Jan 5 11:57:33 GMT 2012
Rank4Aligned Residues278
% Identity35%Templated1vl0a_
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  MNILLFGKTGQVGWELQRALAPLGNLIAFDVHSTDYCGDFSNPEGVAETVRSIRPDIIVNAAAHTAVDKAESEPEFAQLI
Query Conservation 









 

  
   
   
  
    
      

 
             
 


 

                 
Alig confidence 

































...










































Template Conservation   








 

  
   
   
  
    
  ... 

 
   
         
 

  
                  
Template Sequence  XKILITGANGQLGREIQKQLKGKNVEVIPTDVQD. . . LDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKI
Template Known Secondary structure  STTSTTSS
TTT...

TT


S






Template Predicted Secondary structure 










...
















Template SS confidence 















































































   1........10.........20.........30.... .....40.........50.........60.........70.......
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  NATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETDATAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGN
Query Conservation                                                                       
   
 
    
Alig confidence 













































































.
Template Conservation                        
                                             

   
 
  . 
Template Sequence  NAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDG. N
Template Known Secondary structure  TT
GGGS
S

SS
B
TTS




S
SS
SSSS.S
Template Predicted Secondary structure 































.
Template SS confidence 















































































   78.80.........90.........100.........110.........120.........130.........140.........150..... .
 
   161........170.........180.........190.........200.........210.........220.........230.........240
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  NFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVALNKPDVAGLYHLVASGTTTWYDYAALVFEEARKAGIP
Query Conservation                                
                      

      
  
    
    
     
Alig confidence 







































.....































...
Template Conservation                                
 
 
     .....         
      
  

   
    
  ...
Template Sequence  NFVKTXINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVI. . . . . DEKNYGTFHCTCKGICSWYDFAVEIFRLTGID. . .
Template Known Secondary structure 

SSS


.....T




BS



...
Template Predicted Secondary structure 









.....












...
Template SS confidence 















































































   157..160.........170.........180.........190...... ...200.........210.........220........
 
   241........250.........260.........270.........280.........290...
Predicted Secondary structure 

























Query SS confidence 




















































Query Sequence  LALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNEL
Query Conservation                            
  
    

  
    
 
      
Alig confidence  ...

















































Template Conservation  ...                      

        
       
 
   
  
Template Sequence  . . . VKVTPCTTEEFPRPAKRPKYSVLRNYXLELTTGDITREWKESLKEYIDLL
Template Known Secondary structure  ...

STTS

SS


SB

B

TT




B
Template Predicted Secondary structure  ...


















Template SS confidence 




















































   229230.........240.........250.........260.........270........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions