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Job DescriptionP37760
Confidence97.15%DateThu Jan 5 11:57:33 GMT 2012
Rank342Aligned Residues162
% Identity8%Templatec5mdhB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of ternary complex of porcine cytoplasmic malate2 dehydrogenase alpha-ketomalonate and tnad at 2.4 angstroms resolution
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MNILLFGKTGQVGWELQRALAPLGN. . . . . . . LIAFDVHSTD. . . . . . . . . . . . . . . . . YCGDFSNPEGVAETVRSIRPD
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Template Sequence  IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDL. . D
Template Known Secondary structure  STTSTTTTTT
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Query Sequence  IIVNAAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPW. . . LETDATAPLNVYGETKL
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Template Sequence  VAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNR
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   134.....140.........150.........160....
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Query Sequence  AGEKALQEYCAKHLIFRTSWVYAGKGNNFAK
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Template Sequence  AKAQIALKLGVTSDDVKNVIIWGNHSSTQYP
Template Known Secondary structure  T

GGG

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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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