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Job DescriptionP37760
Confidence98.50%DateThu Jan 5 11:57:33 GMT 2012
Rank134Aligned Residues212
% Identity12%Templatec3rihB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short chain dehydrogenase or reductase; PDBTitle: crystal structure of a putative short chain dehydrogenase or reductase2 from mycobacterium abscessus
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30..... ....40.........50... .....
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Query Sequence  NILLFGKTGQVGWELQRALAPLGNLIAFDVHSTD. . . . . . . . . . . . . . . . . . . YCGDFSNPEGVAETVRSI. . . . RPDII
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Template Sequence  SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDV
Template Known Secondary structure  TTTTSTT
SSGGGGTTSSSS


TT
S


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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   5960.........70.........80.........90.........100.........110.........120.........130........
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Query Sequence  VNAAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETDATAPLNVYGETKLAGEKA
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Template Sequence  VCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGF
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TTT

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TT
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   101........110.........120.........130.........140.........150.........160.........170.........180
 
   139140.. .......150.........160.........170.........180.........190.........200.........210.
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Query Sequence  LQEY. . . . . . . CAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVALNKPDVAG
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Template Sequence  MRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSP. . . . . . . VDIGHLAAFLA. TDEAGYITGQ
Template Known Secondary structure  GGGT

SB

TT
TT
TTSS
B
........SGGGTT

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   181........190.........200.........210.........220.........230. ........240.. .......250..
 
   212.......220.
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Query Sequence  LYHLVASGTT
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Template Sequence  AIVVDGGQVL
Template Known Secondary structure  STTTT
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   253......260..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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