Return to main results Retrieve Phyre Job Id

Job DescriptionP37760
Confidence100.00%DateThu Jan 5 11:57:33 GMT 2012
Rank51Aligned Residues276
% Identity16%Templatec3oh8A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:nucleoside-diphosphate sugar epimerase (sula family); PDBTitle: crystal structure of the nucleoside-diphosphate sugar epimerase from2 corynebacterium glutamicum. northeast structural genomics consortium3 target cgr91
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30..... ....40.........50.........60.........70......
Predicted Secondary structure 












....

















Query SS confidence 


































. . . .








































Query Sequence  MNILLFGKTGQVGWELQRALAPLGNLIAFDVHSTD. . . . YCGDFSNPEGVAETVRSIRPDIIVNAAAHTAVDKAESEPEF
Query Conservation 









 

  
   
   
  
    
   ....   

 
             
 


 

             
Alig confidence 


































....







..







..











....




Template Conservation 
 







 

  

  
   

 
  
 
       
  
    ..   

 
 ..
 




     ....     
Template Sequence  LTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNP. . ASDLLDGA. . DVLVHLAGEFND. . . . SHKEA
Template Known Secondary structure 
STTSTT
SSS

TT


TTS
..
TTTTTT
..S





G....GG
Template Predicted Secondary structure 




















..


..







....

Template SS confidence 















































































   148.150.........160.........170.........180.........190.... .....200.. .......210.... .....
 
   77..80.........90.... .....100.........110.........120.........130...... ...140.........150.
Predicted Secondary structure 








..
























...



Query SS confidence 

















. .









































. . .














Query Sequence  AQLINATSVEAIAKAANE. . VGAWVIHYSTDYVFPGNGDMPWLETDATAPLNVYGETKLAGE. . . KALQEYCAKHLIFRT
Query Conservation                    ..                                          ...             
 
Alig confidence 

















..









































...














Template Conservation      

 

  
  

         
  

              
        
   
   
         

  




Template Sequence  IRESRVLPTKFLAELVAESTQCTTXISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASDAGKRVAFIRT
Template Known Secondary structure  T
SS

GGGG
S
TTS


SSTTTT
Template Predicted Secondary structure 

























Template SS confidence 















































































   225....230.........240.........250.........260.........270.........280.........290.........300....
 
   152.......160.........170.........180.........190.........200.........210.........220.........230.
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  SWVYAGKGNNFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVALNKPDVAGLYHLVASGTTTWYDYAALVF
Query Conservation    
 
                                  
                      

      
  
    
 
Alig confidence 








...




































....


























Template Conservation    
 

   ... 
              
      
 
 


 

  

....      
  

   
 

  
    

Template Sequence  GVALSGRGG. . . XLPLLKTLFSGGKFGDGTSWFSWIAIDDLTDIYYRAI. . . . VDAQISGPINAVAPNPVSNADXTKILA
Template Known Secondary structure 
BTTBS...TT




TTS


....
TT

S
S

TT
Template Predicted Secondary structure 




...










....











Template SS confidence 















































































   305....310... ......320.........330.........340.........350 .........360.........370.......
 
   232..... ..240.........250.........260.........270.........280 .........290....
Predicted Secondary structure 


................



























.
Query SS confidence 





. . . . . . . . . . . . . . . .










































.













Query Sequence  EEARKA. . . . . . . . . . . . . . . . GIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLP. DWQVGVKRMLNELF
Query Conservation     
  ................                             
  
    

  
 .   
 
      
 
Alig confidence 





................























.....













.













Template Conservation    

         
 
  
   
     
 
  

   

     
.....       
         

 

  
   
Template Sequence  TQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHELGYEQLAD. . . . . FAQQQEIEANLEDPEEVEQSILSSILNFR
Template Known Secondary structure 


GGGGGG


TT


S
SST



S
.....





Template Predicted Secondary structure 
























.....







Template SS confidence 















































































   381........390.........400.........410.........420...... ...430.........440.........450.....
 
   295.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  TT
Query Conservation    
Alig confidence 

Template Conservation   
Template Sequence  RK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   504.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions