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Job DescriptionP37760
Confidence98.49%DateThu Jan 5 11:57:33 GMT 2012
Rank135Aligned Residues208
% Identity14%Templatec3imfA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:short chain dehydrogenase; PDBTitle: 1.99 angstrom resolution crystal structure of a short chain2 dehydrogenase from bacillus anthracis str. 'ames ancestor'
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30..... ....40.........50... .....
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Query Sequence  NILLFGKTGQVGWELQRALAPLGNLIAFDVHSTD. . . . . . . . . . . . . . . . . . YCGDFSNPEGVAETVRSI. . . . . RPDII
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Template Sequence  VVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDVRNTDDIQKXIEQIDEKFGRIDIL
Template Known Secondary structure  TTTTSTT
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STT


TT
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   5960.........70.........80.........90...... ...100.........110.........120.........130.
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Query Sequence  VNAAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVG. . . . . . . AWVIHYSTDYVFPGNGDMPWLETDATAPLNVYGET
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Template Sequence  INNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXT
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GGG

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GGGGS

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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   132.......140.........150.........160.........170.........180.........190.........200.........210.
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Query Sequence  KLAGEKALQEYCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVALNKPDVAG
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Template Sequence  KTLAVEWGRKYGIRVNAIAPGPIERTGGAEXAKRTIQSVPLGRLG. . . . . . . . . . . . TPEEIAGLAYYLCSDEAAYINGT
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BSS





STTSTT
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B............
SGGGTT

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   165....170.........180.........190.........200......... 210.........220.........230..
 
   212.......220.
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Query Sequence  LYHLVASGTT
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Template Sequence  CXTXDGGQHL
Template Known Secondary structure  STTTTS
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   240.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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