Job Description P37760 Confidence 99.77% Date Thu Jan 5 11:57:33 GMT 2012 Rank 80 Aligned Residues 201 % Identity 9% Template c3h2sA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative nadh-flavin reductase; PDBTitle: crystal structure of the q03b84 protein from lactobacillus2 casei. northeast structural genomics consortium target3 lcr19. Resolution 1.78 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.											.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	I	L	L	F	G	K	T	G	Q	V	G	W	E	L	Q	R	A	L	A	P	L	G	N	L	I	A	F	D	V	H	S	T	D	.	.	.	.	.	.	.	.	.	.	Y	C	G	D	F	S	N	P	E	G	V	A	E	T	V	R	S	I	R	P	D	I	I	V	N	A	A	A	H	T	A	V	D	K	A
Query Conservation																																					.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																																																																	.	.
Template Sequence		X	K	I	A	V	L	G	A	T	G	R	A	G	S	A	I	V	A	E	A	R	R	R	G	H	E	V	L	A	V	V	R	D	P	Q	K	A	A	D	R	L	G	A	T	V	A	T	L	V	K	E	P	L	V	L	T	E	A	D	L	D	S	V	.	.	D	A	V	V	D	A	L	S	V	P	W	G	S	G	R
Template Known Secondary structure								T	T	T	S													T	T								S									T		T	T	S							G	G	G							T	T		.	.	S										T	T	S	S
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.						.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.
Query Sequence		E	S	E	P	E	F	A	Q	L	I	N	A	T	S	V	E	A	I	A	K	A	A	N	E	V	G	A	W	V	I	H	Y	S	T	D	Y	V	F	P	G	N	G	D	M	P	W	L	E	T	D	A	T	A	P	L	N	V	Y	G	E	T	K	L	A	G	E	K	A	L	Q	E	Y	.	.	.	.	.	C	A	K
Query Conservation																																																																										.	.	.	.	.
Alig confidence					.	.	.	.	.	.																																																																.	.	.	.	.
Template Conservation					.	.	.	.	.	.
Template Sequence		G	Y	L	.	.	.	.	.	.	H	L	D	F	A	T	H	L	V	S	L	L	R	N	S	D	T	L	A	V	F	I	L	G	S	A	S	L	A	X	P	G	A	D	H	P	X	I	L	D	F	P	E	S	A	A	S	Q	P	W	Y	D	G	A	L	Y	Q	Y	Y	E	Y	Q	F	L	Q	X	N	A	N	V	N
Template Known Secondary structure		T			.	.	.	.	.	.											T		T	T											G	G	G	S	B		T	T		S	S		G	G	G	G			G	G	G	G	G	S	T	T															T	T		T	T	S
Template Predicted Secondary structure					.	.	.	.	.	.
Template SS confidence
		79	80	.							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	I	F	R	T	S	W	V	Y	A	G	K	G	N	N	F	A	K	T	M	L	R	L	A	K	E	R	E	E	L	A	V	I	N	D	Q	F	G	A	P	T	G	A	E	L	L	A	D	C	T	A	H	A	I	R	V	A	L	N	K	P	D	V	A	G	L	Y	H	L	V	A	S	G
Query Conservation
Alig confidence																				.	.	.	.	.	.	.																																	.	.	.
Template Conservation																				.	.	.	.	.	.	.																																	.	.	.
Template Sequence		W	I	G	I	S	P	S	E	A	F	P	S	G	P	A	T	S	Y	.	.	.	.	.	.	.	V	A	G	K	D	T	L	L	V	G	E	D	G	Q	S	H	I	T	T	G	N	X	A	L	A	I	L	D	Q	L	E	H	.	.	.	P	T	A	I	R	D	R	I	V	V	R	D	A	D
Template Known Secondary structure									S	B										.	.	.	.	.	.	.				S	S	B					T	T	S			B																S	.	.	.				T	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.																																	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170								.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions