Job Description P37760 Confidence 100.00% Date Thu Jan 5 11:57:33 GMT 2012 Rank 47 Aligned Residues 259 % Identity 19% Template c3gpiA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: structure of putative nad-dependent epimerase/dehydratase2 from methylobacillus flagellatus Resolution 1.44 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.									.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure				.																																		.	.	.	.	.	.	.	.
Query SS confidence				.																																		.	.	.	.	.	.	.	.
Query Sequence		M	N	.	I	L	L	F	G	K	T	G	Q	V	G	W	E	L	Q	R	A	L	A	P	L	G	N	L	I	A	F	D	V	H	S	T	D	.	.	.	.	.	.	.	.	Y	C	G	D	F	S	N	P	E	G	V	A	E	T	V	R	S	I	R	P	D	I	I	V	N	A	A	A	H	T	A	V	D	K	A	E
Query Conservation				.																																		.	.	.	.	.	.	.	.
Alig confidence				.							.																											.	.	.	.	.	.	.	.																			.	.								.	.	.	.	.	.	.	.
Template Conservation											.																																																					.	.								.	.	.	.	.	.	.	.
Template Sequence		L	S	K	I	L	I	A	G	C	.	G	D	L	G	L	E	L	A	R	R	L	T	A	Q	G	H	E	V	T	G	L	R	R	S	A	Q	P	M	P	A	G	V	Q	T	L	I	A	D	V	T	R	P	D	T	L	A	S	I	V	H	L	R	.	.	P	E	I	L	V	Y	C	.	.	.	.	.	.	.	.	V
Template Known Secondary structure											.	S													T	T									T	T	S				T	T								T	T		G	G	G		T	T	G	G	G	G		.	.		S						.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.																																																					.	.								.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.									.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	P	E	F	A	Q	L	I	N	A	T	S	V	E	A	I	A	K	A	A	N	E	V	G	A	W	V	I	H	Y	S	T	D	Y	V	F	P	G	N	G	D	M	P	W	L	E	T	D	A	T	A	P	L	N	V	Y	G	E	T	K	L	A	G	E	K	A	L	Q	E	Y	C	A	K	H	L	I	F	R	T
Query Conservation
Alig confidence																																																																						.	.
Template Conservation																																																																						.	.
Template Sequence		A	A	S	E	Y	S	L	S	Y	V	E	G	L	R	N	T	L	S	A	L	E	G	A	P	L	Q	H	V	F	F	V	S	S	T	G	V	Y	G	Q	E	V	E	E	W	L	D	E	D	T	P	P	I	A	K	D	F	S	G	K	R	M	L	E	A	E	A	L	L	.	.	A	A	Y	S	S	T	I	L	R	F
Template Known Secondary structure										S											T	T	T	S											G	G	G						S	S				T	T	S						S													G	.	.	G	G	S	S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	V	Y	A	G	K	G	N	N	F	A	K	T	M	L	R	L	A	K	E	R	E	E	L	A	V	I	N	D	Q	F	G	A	P	T	G	A	E	L	L	A	D	C	T	A	H	A	I	R	V	A	L	N	K	P	D	V	A	G	L	Y	H	L	V	A	S	G	T	T	T	W	Y	D	Y	A	A	L	V	F
Query Conservation
Alig confidence											.	.	.	.	.																																							.
Template Conservation											.	.	.	.	.																																							.
Template Sequence		S	G	I	Y	G	P	G	R	L	.	.	.	.	.	R	M	I	R	Q	A	Q	T	P	E	Q	W	P	A	R	N	A	W	T	N	R	I	H	R	D	D	G	A	A	F	I	A	Y	L	I	Q	Q	R	.	S	H	A	V	P	E	R	L	Y	I	V	T	D	N	Q	P	L	P	V	H	D	L	L	R	W	L	A
Template Known Secondary structure						B	T	T	B		.	.	.	.	.						T	T		G	G	G	S		S	S	B																							.	T	T	S				S							S
Template Predicted Secondary structure											.	.	.	.	.																																							.
Template SS confidence
		153	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		E	E	A	R	K	A	G	I	P	L	A	L	N	K	L	N	A	V	P	T	T	A	Y	P	T	P	A	R	R	P	H	N	S	R	L	N	T	E	K	F	Q	Q	N	F	A	L	V	L	P	.	.	D	W	Q	V	G	V	K	R	M	L	N	E	L
Query Conservation																																																			.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.															.							.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		D	R	Q	G	I	A	Y	P	A	G	A	T	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	G	N	K	K	L	S	N	A	R	L	L	A	.	S	G	Y	Q	L	I	Y	P	D	Y	V	S	G	Y	G	A	L	L	A	A	M
Template Known Secondary structure				T	T						S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		S	S											.	T	T				S	S		S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240															.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions