Job Description P37760 Confidence 97.44% Date Thu Jan 5 11:57:33 GMT 2012 Rank 318 Aligned Residues 159 % Identity 11% Template c3fi9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from porphyromonas2 gingivalis Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.											.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																											.	.											.	.	.	.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.											.	.	.	.										.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	I	L	L	F	G	K	T	G	Q	V	G	W	E	L	Q	R	A	L	A	P	L	G	N	.	.	L	I	A	F	D	V	H	S	T	D	.	.	.	.	Y	C	G	D	F	S	N	P	E	.	.	.	.	.	.	.	.	.	.	G	V	A	E	T	V	R	S	I	R	P	D	I	I	V	N	A	A	A	H
Query Conservation																											.	.											.	.	.	.										.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.											.	.	.	.										.	.	.	.	.	.	.	.	.	.										.	.									.
Template Conservation																																																																							.	.									.
Template Sequence		E	K	L	T	I	V	G	A	A	G	M	I	G	S	N	M	A	Q	T	A	A	M	M	R	L	T	P	N	L	C	L	Y	D	P	F	A	V	G	L	E	G	V	A	E	E	I	R	H	C	G	F	E	G	L	N	L	T	F	T	S	D	I	K	E	A	L	T	D	A	.	.	K	Y	I	V	S	S	G	G	.
Template Known Secondary structure		S						S	T	T	S													T	T			S							S																		T	T							S							T	T		.	.									.
Template Predicted Secondary structure																																																																							.	.									.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	V	D	K	A	E	S	E	P	E	F	A	Q	L	I	N	A	T	S	V	E	A	I	A	K	A	A	N	E	V	G	A	W	V	I	H	Y	S	T	D	Y	V	F	P	G	N	G	D	M	P	W	L	E	T	D	A	T	A	P	L	N	V	Y	G	E	T	K	L	A	G	E	K	A	L	Q	E	Y	C	A
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	T	R	E	D	L	L	K	G	N	A	E	I	A	A	Q	L	G	K	D	I	K	S	Y	C	P	D	C	K	H	V	I	I	I	F	N	P	A	D	I	T	G	L	V	T	L	I	Y	S	G	L	K	P	S	Q	V	T	T	L	A	G	L	D	S	T	R	L	Q	S	E	L	A	K	H	F	G	I
Template Known Secondary structure		.	.	.	.																									T	T								S	S	S													T			G	G	G																					T	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	L	I	F	R	T	S	W	V	Y	A	G	K	G	N	N	F	A	K	T	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	S	L	V	T	N	T	R	T	Y	G	G	H	G	E	Q	M	A	V	F	A
Template Known Secondary structure			G	G	G									S	S	G	G	G					G
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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