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Job DescriptionP37760
Confidence98.21%DateThu Jan 5 11:57:33 GMT 2012
Rank214Aligned Residues153
% Identity15%Templatec3diiB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of a carbohydrate specific scor enzyme2 from clostridium thermocellum, ligand-free form
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30..... ....40.........50... ......60..
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Query Sequence  NILLFGKTGQVGWELQRALAPLGNLIAFDVHSTD. . . . . . . . . . . . . . YCGDFSNPEGVAETVRSI. . . . . RPDIIVNAA
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Template Sequence  GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNA
Template Known Secondary structure  STTSTT
S
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   63......70.........80.........90.........100.........110.........120.........130.........140..
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Query Sequence  AHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETDATAPLNVYGETKLAGEKALQEY
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Template Sequence  CGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSL
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GGGT

TTT


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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   143 ......150....
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Query Sequence  C. . AKHLIFRTSWV
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Template Sequence  GPDVLVNCIAPGWI
Template Known Secondary structure  TTTS
SB
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   165....170........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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