Job Description P37760 Confidence 99.97% Date Thu Jan 5 11:57:33 GMT 2012 Rank 60 Aligned Residues 209 % Identity 21% Template c2zklA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:capsular polysaccharide synthesis enzyme cap5f; PDBTitle: crystal structure of capsular polysaccharide assembling protein capf2 from staphylococcus aureus Resolution 2.61 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	I	L	L	F	G	K	T	G	Q	V	G	W	E	L	Q	R	A	L	A	P	L	G	N	L	I	A	F	D	V	H	S	T	D	Y	C	G	D	F	S	N	P	E	G	V	A	E	T	V	R	S	I	R	P	D	I	I	V	N	A	A	A	H	T	A	V	D	K	A	E	S	E	P	E	F	A	Q	L	I
Query Conservation
Alig confidence																																		.	.	.	.	.	.																.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.																.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	N	I	V	I	T	G	A	K	G	F	V	G	K	N	L	K	A	D	L	T	S	T	T	D	H	H	I	F	E	V	H	.	.	.	.	.	.	R	Q	T	K	E	E	E	L	E	S	A	L	L	K	A	.	.	D	F	I	V	H	L	A	G	V	.	.	.	.	.	.	.	.	.	.	.	.	F	S	L	G
Template Known Secondary structure								T	T	T	S																							.	.	.	.	.	.	T	T														.	.	S									.	.	.	.	.	.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.																.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.							.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.													.	.	.	60
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		N	A	T	S	V	E	A	I	A	K	A	A	N	E	V	G	A	W	V	I	H	Y	S	T	D	Y	V	F	P	G	N	G	D	M	P	W	L	E	T	D	A	T	A	P	L	N	V	Y	G	E	T	K	L	A	G	E	K	A	L	.	.	.	.	Q	E	Y	C	A	K	H	L	I	F	R	T	S	W	V	Y	A
Query Conservation																																																													.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	S	Y	L	D	H	V	L	D	I	L	T	R	N	T	K	K	P	A	I	L	L	S	S	S	I	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	D	N	P	Y	G	E	S	K	L	Q	G	E	Q	L	L	R	E	Y	A	E	E	Y	G	N	T	V	Y	I	Y	R	W	P	N	L	F	G
Template Known Secondary structure														T	T		S	S										G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.														.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		157	.	.					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure					.	.	.	.																						.
Query SS confidence					.	.	.	.																						.
Query Sequence		G	K	G	.	.	.	.	N	N	F	A	K	T	M	L	R	L	A	K	E	R	E	E	L	A	V	I	N	.	D	Q	F	G	A	P	T	G	A	E	L	L	A	D	C	T	A	H	A	I	R	V	A	L	N	K	P	D	V	A	G	L	Y	H	L	V	A	S	G	T	T	T	W	Y	D	Y	A	A	L	V	F
Query Conservation					.	.	.	.																						.
Alig confidence					.	.	.	.																						.																							.	.
Template Conservation																																																					.	.
Template Sequence		K	W	C	K	P	N	Y	N	S	V	I	A	T	F	C	Y	K	I	A	R	N	E	E	I	Q	V	N	D	R	N	V	E	L	T	L	N	Y	V	D	D	I	V	A	E	I	K	R	A	I	E	G	.	.	T	P	T	I	E	N	G	V	P	T	V	P	N	V	F	K	V	T	L	G	E	I	V	D	L	L	Y
Template Known Secondary structure		T	T			T	T	T	T											T	T	T						S		T	T																			T	T	T	.	.						T	T					S
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	A	R	K	A	G	I	P	L	A	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	F	K	Q	S	R	L	D	R	T	L	P	K
Template Known Secondary structure						T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions