Job Description P37760 Confidence 99.94% Date Thu Jan 5 11:57:33 GMT 2012 Rank 68 Aligned Residues 258 % Identity 16% Template c2vrcD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:triphenylmethane reductase; PDBTitle: crystal structure of the citrobacter sp. triphenylmethane2 reductase complexed with nadp(h) Resolution 2.5 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.													.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																									.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	I	L	L	F	G	K	T	G	Q	V	G	W	E	L	Q	R	A	L	A	P	L	.	.	G	N	L	I	A	F	D	V	H	S	T	D	.	.	.	.	.	.	.	.	.	.	.	.	Y	C	G	D	F	S	N	P	E	G	V	A	E	T	V	R	S	I	R	P	D	I	I	V	N	A	A	A	H	T	A
Query Conservation																									.	.													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.													.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																																																																					.	.
Template Sequence		F	S	I	A	V	T	G	A	T	G	Q	L	G	G	L	V	I	Q	H	L	X	A	A	V	P	A	S	Q	I	I	A	I	V	R	N	V	E	K	A	S	T	L	A	D	Q	G	V	E	V	R	H	G	D	Y	N	Q	P	E	S	L	Q	K	A	F	A	G	V	.	.	S	K	L	L	F	I	S	G	P	H	Y
Template Known Secondary structure								S	T	T	S														S		G	G	G						S	S	G	G	G	G						T	T								T	T		G	G	G						T	T		.	.	S
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	K	A	E	S	E	P	E	F	A	Q	L	I	N	A	T	S	V	E	A	I	A	K	A	A	N	E	V	G	A	W	V	I	H	Y	S	T	D	Y	V	F	P	G	N	G	D	M	P	W	L	E	T	D	A	T	A	P	L	N	V	Y	G	E	T	K	L	A	G	E	K	A	L	Q	E	Y	C	A	K	H
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	N	T	L	.	.	.	.	.	.	.	.	.	L	I	V	Q	H	A	N	V	V	K	A	A	R	D	A	G	V	K	H	I	A	Y	T	G	Y	A	F	A	E	E	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	L	A	H	V	H	L	A	T	E	Y	A	T	R	T	T	N	I	P	Y
Template Known Secondary structure						.	.	.	.	.	.	.	.	.															T	T		S								T	T	G	G	G		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S															T	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.										.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.															.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	F	R	T	S	W	V	Y	A	G	K	G	N	N	F	A	K	T	M	L	R	L	A	K	E	R	E	E	L	A	V	I	N	D	Q	F	G	A	P	T	G	A	E	L	L	A	D	C	T	A	H	A	I	R	V	A	L	N	K	P	D	V	A	G	L	Y	H	L	V	A	S	G	T	T	T	W	Y	D	Y
Query Conservation
Alig confidence																									.	.	.																													.	.	.
Template Conservation																									.	.	.																													.	.	.
Template Sequence		T	F	L	R	N	A	L	Y	T	D	F	F	V	N	E	G	L	R	A	S	T	E	S	.	.	.	G	A	I	V	T	N	A	G	S	G	I	V	N	S	V	T	R	N	E	L	A	L	A	A	A	T	V	L	.	.	.	T	E	E	G	H	E	N	K	T	Y	N	L	V	S	N	Q	P	W	T	F	D	E	L
Template Known Secondary structure									B	S	T	T	T	S	S	T	T								.	.	.	S					S		T	T			B			B														.	.	.	T	S	S	S		T	T								S	S		B
Template Predicted Secondary structure																									.	.	.																													.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.														.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	L	V	F	E	E	A	R	K	A	G	I	P	L	A	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	N	A	V	P	T	T	A	Y	P	T	P	A	R	R	P	H	N	S	R	L	N	T	E	K	F	Q	Q	N	F	A	L	V	L	P	D	W	Q	V	G	V	K	R	M	L
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation																																																																	.
Template Sequence		A	Q	I	L	S	E	V	S	G	K	K	V	V	H	Q	P	V	S	F	E	E	E	K	N	F	X	V	N	A	G	V	P	E	P	F	A	E	I	T	A	A	I	Y	D	A	I	S	K	G	E	A	S	K	T	S	D	D	L	Q	K	L	I	G	.	S	L	T	P	L	K	E	T	V	K	Q	A	L
Template Known Secondary structure										S	S																			T	T																	T	T	T	T	T					S								.	S										T	T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions