Return to main results Retrieve Phyre Job Id

Job DescriptionP37760
Confidence96.63%DateThu Jan 5 11:57:33 GMT 2012
Rank390Aligned Residues101
% Identity15%Templatec2pwzG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of the apo form of e.coli malate dehydrogenase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20... ......30..... ....40.........50.........60...
Predicted Secondary structure 





...






..............













Query SS confidence 






















. . .











. . . . . . . . . . . . . .



























Query Sequence  MNILLFGKTGQVGWELQRALAPL. . . GNLIAFDVHSTD. . . . . . . . . . . . . . YCGDFSNPEGVAETVRSIRPDIIVNAAA
Query Conservation 









 

  
   
   ...
  
    
   ..............   

 
             
 


 

Alig confidence 






















...











..............

















..







Template Conservation 


 


  
 

   
  
        

 
 
          

                    
  
..







Template Sequence  MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGA. . DVVLISAG
Template Known Secondary structure 
TTTSS
TT
SSTTTS
SS
SS

TT
..S


Template Predicted Secondary structure 























..



Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70 ........
 
   64.....70.........80.........90.........100...
Predicted Secondary structure 
















Query SS confidence 







































Query Sequence  HTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWVIHYS
Query Conservation                                          
Alig confidence 







































Template Conservation          
   
  
  
   
   
    
  
 



Template Sequence  VARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT
Template Known Secondary structure 



SS


TTS
S
Template Predicted Secondary structure 











Template SS confidence 







































   7980.........90.........100.........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions