Job Description P37760 Confidence 100.00% Date Thu Jan 5 11:57:33 GMT 2012 Rank 39 Aligned Residues 288 % Identity 17% Template c2hrzA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nucleoside-diphosphate-sugar epimerase; PDBTitle: the crystal structure of the nucleoside-diphosphate-sugar epimerase2 from agrobacterium tumefaciens Resolution 1.85 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.																				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	I	L	L	F	G	K	T	G	Q	V	G	W	E	L	Q	R	A	L	A	P	L	G	N	L	I	A	F	D	V	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	Y	C	G	D	F	S	N	P	E	G	V	A	E	T	V	R	S	I	R	P	D	I	I	V	N	A
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	H	I	A	I	I	G	A	A	G	X	V	G	R	K	L	T	Q	R	L	V	K	D	G	S	L	G	G	K	P	V	E	K	F	T	L	I	D	V	F	Q	P	E	A	P	A	G	F	S	G	A	V	D	A	R	A	A	D	L	S	A	P	G	E	A	E	K	L	V	E	A	R	P	D	V	I	F	H	L	A
Template Known Secondary structure								T	T	T	S																	T	T											S	S						T	T			S									T	T	S	T	T								T			S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		A	A	H	T	A	V	D	K	A	E	S	E	P	E	F	A	Q	L	I	N	A	T	S	V	E	A	.	.	.	.	I	A	K	A	A	N	E	V	G	A	W	V	I	H	Y	S	T	D	Y	V	F	P	G	N	G	D	M	P	W	L	E	T	D	A	T	A	P	L	N	V	Y	G	E	T	K	L	A	G	E	K
Query Conservation																												.	.	.	.
Alig confidence																												.	.	.	.
Template Conservation
Template Sequence		A	I	V	S	G	E	A	E	L	D	F	D	K	G	Y	R	I	N	L	D	G	T	R	Y	L	F	D	A	I	R	I	A	N	G	K	D	G	Y	K	P	R	V	V	F	T	S	S	I	A	V	F	G	A	P	L	P	Y	P	I	P	D	E	F	H	T	T	P	L	T	S	Y	G	T	Q	K	A	I	C	E	L
Template Known Secondary structure																				T																													G	G	G			S	S			S	S	B		T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		138	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure							.	.	.	.																.	.	.	.	.	.																							.	.
Query SS confidence							.	.	.	.																.	.	.	.	.	.																							.	.
Query Sequence		A	L	Q	E	Y	.	.	.	.	C	A	K	H	L	I	F	R	T	S	W	V	Y	A	G	.	.	.	.	.	.	K	G	N	N	F	A	K	T	M	L	R	L	A	K	E	R	E	E	L	A	V	I	.	.	N	D	Q	F	G	A	P	T	G	A	E	L	L	A	D	C	T	A	H	A	I	R	V	A	L	N
Query Conservation							.	.	.	.																.	.	.	.	.	.																							.	.
Alig confidence							.	.	.	.																.	.	.	.	.	.																							.	.																								.
Template Conservation																																																																															.
Template Sequence		L	L	S	D	Y	S	R	R	G	F	F	D	G	I	G	I	R	L	P	T	I	C	I	R	P	G	K	P	N	A	A	A	S	G	F	F	S	N	I	L	R	E	P	L	V	G	Q	E	A	V	L	P	V	P	E	S	I	R	H	W	H	A	S	P	R	S	A	V	G	F	L	I	H	G	A	X	I	.	D	V
Template Known Secondary structure									T	T	S												T	T			S	S				S	G	G	G											T	T							S		T	T																					S	.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		K	P	D	V	A	G	L	Y	H	L	V	A	S	G	T	T	T	W	Y	D	Y	A	A	L	V	F	E	E	A	R	K	A	G	I	P	L	A	L	N	K	L	N	A	V	P	T	T	A	Y	P	T	P	A	R	R	P	H	N	S	R	L	N	T	E	K	F	Q	Q	N	F	A	L	V	L	P	.	D	W	Q	V
Query Conservation																																																																													.
Alig confidence																																																								.	.	.	.	.										.							.
Template Conservation																																																								.	.	.	.	.										.
Template Sequence		E	K	V	G	P	R	R	N	L	S	X	P	G	L	S	A	T	V	G	E	Q	I	E	A	L	R	K	V	A	G	E	K	A	V	A	L	I	R	R	E	P	N	E	X	I	X	R	X	C	E	G	W	A	P	.	.	.	.	.	G	F	E	A	K	R	A	R	E	.	L	G	F	T	A	E	S	S	F	E	E
Template Known Secondary structure						S																														T	T														T	T	S			.	.	.	.	.		B								.	T	T					S	S
Template Predicted Secondary structure																																																								.	.	.	.	.										.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.						.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.
		285	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	K	R	M	L	N	E	L	F	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	Q	V	H	I	E	D	E	L	G
Template Known Secondary structure											S	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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