Job Description P37760 Confidence 99.94% Date Thu Jan 5 11:57:33 GMT 2012 Rank 66 Aligned Residues 224 % Identity 19% Template c2gn9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:udp-glcnac c6 dehydratase; PDBTitle: crystal structure of udp-glcnac inverting 4,6-dehydratase in complex2 with nadp and udp-glc Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.																	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																								.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	L	L	F	G	K	T	G	Q	V	G	W	E	L	Q	R	A	L	A	P	L	.	.	G	N	L	I	A	F	D	V	H	S	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	C	G	D	F	S	N	P	E	G	V	A	E	T	V	R	S	I	R	P	D	I	I	V	N	A	A	A
Query Conservation																								.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																																																																								.	.
Template Sequence		T	I	L	I	T	G	G	T	G	S	F	G	K	C	F	V	R	K	V	L	D	T	T	N	A	K	K	I	I	V	Y	S	R	D	E	L	K	Q	S	E	M	A	M	E	F	N	D	P	R	M	R	F	F	I	G	D	V	R	D	L	E	R	L	N	Y	A	L	E	G	V	.	.	D	I	C	I	H	A	A	A
Template Known Secondary structure							T	T	T	S														S	B		S							S												S			T	T								T	T									T	T	T		.	.	S
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		H	T	A	V	D	K	A	E	S	E	P	E	F	A	Q	L	I	N	A	T	S	V	E	A	I	A	K	A	A	N	E	V	G	A	W	V	I	H	Y	S	T	D	Y	V	F	P	G	N	G	D	M	P	W	L	E	T	D	A	T	A	P	L	N	V	Y	G	E	T	K	L	A	G	E	K	A	L	Q	E	Y	.
Query Conservation																																																																																	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	H	V	P	I	A	E	Y	N	P	L	E	C	I	K	T	N	I	M	G	A	S	N	V	I	N	A	C	L	K	N	A	I	S	Q	V	I	A	L	S	T	D	K	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	I	N	L	Y	G	A	T	K	L	C	S	D	K	L	F	V	S	A	N
Template Known Secondary structure											S																						T	T		S								G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S																G	G
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.														.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
								143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																				.
Query SS confidence		.	.	.	.	.	.																																				.
Query Sequence		.	.	.	.	.	.	C	A	K	H	L	I	F	R	T	S	W	V	Y	A	G	K	G	N	N	F	A	K	T	M	L	R	L	A	K	E	R	E	E	L	A	.	V	I	N	D	Q	F	G	A	P	T	G	A	E	L	L	A	D	C	T	A	H	A	I	R	V	A	L	N	K	P	D	V	A	G	L	Y	H	L
Query Conservation		.	.	.	.	.	.																																				.
Alig confidence		.	.	.	.	.	.																																				.																								.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.
Template Sequence		N	F	K	G	S	S	Q	T	Q	F	S	V	V	R	Y	G	N	V	V	G	S	R	G	S	V	V	P	F	F	K	K	L	V	Q	N	K	A	S	E	I	P	I	T	D	I	R	M	T	R	F	W	I	T	L	D	E	G	V	S	F	V	L	K	S	L	.	.	.	.	.	K	R	M	H	G	G	E	I	F	V
Template Known Secondary structure		G			S	S	S													S	S		T	T		S	T	T								T			S					S		S	S																				.	.	.	.	.					S	S
Template Predicted Secondary structure																																																																			.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.						.	.	.	.	.	.	.	.	230	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	S	G	T	T	T	W	Y	D	Y	A	A	L	V	F	E	E	A	R	K	A	G	I	P	L	A	L	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	I	P	S	M	K	M	T	D	L	A	K	A	L	A	P	N	T	P	T	K	I	I	G	I	R	P	G	E
Template Known Secondary structure									S									S	S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions