Job Description P37760 Confidence 100.00% Date Thu Jan 5 11:57:33 GMT 2012 Rank 24 Aligned Residues 263 % Identity 29% Template c2ggsB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:273aa long hypothetical dtdp-4-dehydrorhamnose PDBTitle: crystal structure of hypothetical dtdp-4-dehydrorhamnose2 reductase from sulfolobus tokodaii Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		M	N	I	L	L	F	G	K	T	G	Q	V	G	W	E	L	Q	R	A	L	A	P	L	G	N	L	I	A	F	D	V	H	S	T	D	.	.	.	Y	C	G	D	F	S	N	P	E	G	V	A	E	T	V	R	S	I	R	P	D	I	I	V	N	A	A	A	H	T	A	V	D	K	A	E	S	E	P	E	F	A
Query Conservation																																					.	.	.
Alig confidence																																					.	.	.
Template Conservation
Template Sequence		M	R	T	L	I	T	G	A	S	G	Q	L	G	I	E	L	S	R	L	L	S	E	R	H	E	V	I	K	V	Y	N	S	S	E	I	Q	G	G	Y	K	L	D	L	T	D	F	P	R	L	E	D	F	I	I	K	K	R	P	D	V	I	I	N	A	A	A	M	T	D	V	D	K	C	E	I	E	K	E	K	A
Template Known Secondary structure								S	T	T	S											T	T	T	S							S	S	S			S	S	B					T	T															S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	I	N	A	T	S	V	E	A	I	A	K	A	A	N	E	V	G	A	W	V	I	H	Y	S	T	D	Y	V	F	P	G	N	G	D	M	P	W	L	E	T	D	A	T	A	P	L	N	V	Y	G	E	T	K	L	A	G	E	K	A	L	Q	E	Y	C	A	K	H	L	I	F	R	T	S	W	V	Y	A	G
Query Conservation
Alig confidence																																													.																			.	.
Template Conservation																																													.																			.	.
Template Sequence		Y	K	I	N	A	E	A	V	R	H	I	V	R	A	G	K	V	I	D	S	Y	I	V	H	I	S	T	D	Y	V	F	D	G	E	K	G	N	Y	K	E	E	D	I	.	P	N	P	I	N	Y	Y	G	L	S	K	L	L	G	E	T	F	A	.	.	L	Q	D	D	S	L	I	I	R	T	S	G	I	F	R	N
Template Known Secondary structure						T													T	T									G	G	G	S		S	S	S		S	B		T	T	S		.				S	S														.	.			T	T											S	S
Template Predicted Secondary structure																																													.																			.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	N	N	F	A	K	T	M	L	R	L	A	K	E	R	E	E	L	A	V	I	N	D	Q	F	G	A	P	T	G	A	E	L	L	A	D	C	T	A	H	A	I	R	V	A	L	N	K	P	D	V	A	G	L	Y	H	L	V	A	S	G	T	T	T	W	Y	D	Y	A	A	L	V	F	E	E	A	R	K	A
Query Conservation
Alig confidence				.	.	.																																							.	.	.	.	.													.
Template Conservation				.	.	.																																							.	.	.	.	.													.
Template Sequence		K	G	.	.	.	F	P	I	Y	V	Y	K	T	L	K	E	G	K	T	V	F	A	F	K	G	Y	Y	S	P	I	S	A	R	K	L	A	S	A	I	L	E	L	L	.	.	.	.	.	E	L	R	K	T	G	I	I	H	V	A	G	.	E	R	I	S	R	F	E	L	A	L	K	I	K	E	K	F	N	L	P
Template Known Secondary structure		S	S	.	.	.										T	T	T							S																				.	.	.	.	.		T	T										.
Template Predicted Secondary structure				.	.	.																																							.	.	.	.	.													.
Template SS confidence
		158	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	P	L	A	L	N	K	L	N	A	V	P	T	T	A	Y	P	T	P	A	R	R	P	H	N	S	R	L	N	T	E	K	F	Q	Q	N	F	A	L	V	L	P	D	W
Query Conservation
Alig confidence													.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.
Template Sequence		G	E	V	K	E	V	D	E	V	R	G	.	.	.	.	.	.	.	W	I	A	K	R	P	Y	D	S	S	L	D	S	S	R	A	R	K	I	L	S	T	D	F	Y	T	L
Template Known Secondary structure								S	S		T	T	.	.	.	.	.	.	.			S				S	B			B											S			S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.								240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions