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Job DescriptionP37760
Confidence98.07%DateThu Jan 5 11:57:33 GMT 2012
Rank247Aligned Residues211
% Identity12%Templatec2ekqB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:2-deoxy-d-gluconate 3-dehydrogenase; PDBTitle: structure of tt0495 protein from thermus thermophilus
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30..... ....40.........50.........60.......
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Query Sequence  NILLFGKTGQVGWELQRALAPLGNLIAFDVHSTD. . . . . . . . . . . . . . YCGDFSNPEGVAETVRSIRPDIIVNAAAHTAV
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Template Sequence  KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAAAVNVR
Template Known Secondary structure  TTTSTT
SS
T


TTTS
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   68.70.........80.........90.........100.........110.........120.........130.........140..
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Query Sequence  DKAESEPEFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETDATAPLNVYGETKLAGEKALQEY. . . . .
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Template Sequence  KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWA
Template Known Secondary structure 

TTT

TT


GGGTS

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G
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   143......150.........160.........170.........180.........190.........200.........210........
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Query Sequence  . . CAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVALNKPDVAGLYHLVAS
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Template Sequence  RLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPM. . . . . GRWARPEEIARVAAVLC. GDEAEYLTGQAVAVDGG
Template Known Secondary structure  GGT
SB
SGGGT
TT
TT.....SS
B
T.SGGGTT

S
STT
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   164.....170.........180.........190.........200. ........210........ .220.........230.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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